SCOPe 2.06: Domain d2dnsd_: 2dns D:

Lineage for d2dnsd_ (2dns D:)

1. Root: SCOPe 2.06

2. Class e: Multi-domain proteins (alpha and beta) [56572] (69 folds)

3. Fold e.3: beta-lactamase/transpeptidase-like [56600] (1 superfamily)
   contains a cluster of helices and an alpha+beta sandwich

4. Superfamily e.3.1: beta-lactamase/transpeptidase-like [56601] (4 families)

5. Family e.3.1.1: beta-Lactamase/D-ala carboxypeptidase [56602] (19 proteins)

6. Protein D-Amino acid amidase DaaA [144038] (1 species)

7. Species Ochrobactrum anthropi [TaxId:529] [144039] (6 PDB entries)
   Uniprot Q9LCC8 2-363

8. Domain d2dnsd_: 2dns D: [131590]
   automated match to d2dnsa1
   complexed with ba, dpn

Details for d2dnsd_

PDB Entry: 2dns, 2.4 Å

PDB Description: The crystal structure of D-amino acid amidase from Ochrobactrum anthropi SV3 complexed with D-Phenylalanine

PDB Compounds: (D:) D-amino acid amidase

SCOPe Domain Sequences for d2dnsd_:

Sequence, based on SEQRES records:

>d2dnsd_ e.3.1.1 (D:) D-Amino acid amidase DaaA {Ochrobactrum anthropi [TaxId: 529]}
sdlnnaiqgilddhvargvvgvslalclpgeetslyqsgyadkfnkmpmtgdhlfriasc
tksfiatglhllvqdgtvdldepitrwfpdlpkaaqmpvrillnhrsglpdfetsmpmis
dkswtaqeivdfsfrhgvqkepwhgmeysntgyvlagmiiahetgkpysdhlrsrifapl
gmkdtwvgthetfpiereargymhaaaddenpqwdvsgagdpvdgvwdstewfplsgana
agdmvstprdivkflnalfdgrildqkrlwemkdnikpaffpgsntvanghglllmrygs
selkghlgqipghtsimgrdeetgaalmliqnsgagdfesfylkgvnepvdrvleaikns
r

Sequence, based on observed residues (ATOM records):

>d2dnsd_ e.3.1.1 (D:) D-Amino acid amidase DaaA {Ochrobactrum anthropi [TaxId: 529]}
sdlnnaiqgilddhvargvvgvslalclpgeetslyqsgyadkfnkmpmtgdhlfriasc
tksfiatglhllvqdgtvdldepitrwfpdlpkaaqmpvrillnhrsglpdfetsmpmis
dkswtaqeivdfsfrhgvqkepwhgmeysntgyvlagmiiahetgkpysdhlrsrifapl
gmkdtwvgthetfpiereargymhaaapqwdgagdpvdgvwdstewfplsganaagdmvs
tprdivkflnalfdgrildqkrlwemkdnikpaffpgsntvanghglllmrygsselkgh
lgqipghtsimgrdeetgaalmliqnsgagdfesfylkgvnepvdrvleaiknsr

Timeline for d2dnsd_:

• d2dnsd_ first appeared in SCOP 1.73, called d2dnsd1
  
• d2dnsd_ appears in SCOPe 2.05
  
• d2dnsd_ appears in SCOPe 2.07
  
• d2dnsd_ appears in the current release, SCOPe 2.08