SCOPe 2.06: Domain d2d69a1: 2d69 A:134-424

Lineage for d2d69a1 (2d69 A:134-424)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families)
   automatically mapped to Pfam PF00016

5. Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 proteins)
   N-terminal domain is alpha+beta

6. Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [51651] (12 species)

7. Species Pyrococcus horikoshii [TaxId:53953] [141850] (3 PDB entries)
   Uniprot O58677 134-424

8. Domain d2d69a1: 2d69 A:134-424 [131292]
   Other proteins in same PDB: d2d69a2, d2d69b2, d2d69d2, d2d69e2
   automated match to d2cwxa1
   complexed with so4

Details for d2d69a1

PDB Entry: 2d69, 1.9 Å

PDB Description: Crystal structure of the complex of sulfate ion and octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Pyrococcus horikoshii OT3 (form-2 crystal)

PDB Compounds: (A:) Ribulose bisphosphate carboxylase

SCOPe Domain Sequences for d2d69a1:

Sequence; same for both SEQRES and ATOM records:

>d2d69a1 c.1.14.1 (A:134-424) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Pyrococcus horikoshii [TaxId: 53953]}
kgpqfgvqgirefmgvkdrpltatvpkpkmgwsveeyaeiayelwsggidllkddenfts
fpfnrfeervrklyrvrdrveaetgetkeylinitgpvnimekraemvaneggqyvmidi
vvagwsalqymrevtedlglaihahramhaaftrnprhgitmlalakaarmigvdqihtg
tavgkmagnyeeikrindfllskwehirpvfpvasgglhpglmpelirlfgkdlviqagg
gvmghpdgpragakalrdaidaaiegvdldekaksspelkkslrevglska

Timeline for d2d69a1:

• d2d69a1 first appeared in SCOP 1.73
  
• d2d69a1 appears in SCOPe 2.05
  
• d2d69a1 appears in SCOPe 2.07
  
• d2d69a1 appears in the current release, SCOPe 2.08