SCOP 1.73: Domain d2ca6b1: 2ca6 B:2-345

Lineage for d2ca6b1 (2ca6 B:2-345)

1. Root: SCOP 1.73

2. Class c: Alpha and beta proteins (a/b) [51349] (141 folds)

3. Fold c.10: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046] (3 superfamilies)
   2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies

4. Superfamily c.10.1: RNI-like [52047] (3 families)
   regular structure consisting of similar repeats

5. Family c.10.1.2: Rna1p (RanGAP1), N-terminal domain [52052] (1 protein)
   this is a repeat family; one repeat unit is 1k5d C:168-196 found in domain

6. Protein Rna1p (RanGAP1), N-terminal domain [52053] (1 species)
   GTPase-activating protein for SpI1, ortologue of Ran
   duplication: consists of 11 repeats

7. Species Fission yeast (Schizosaccharomyces pombe) [TaxId:4896] [52054] (4 PDB entries)

8. Domain d2ca6b1: 2ca6 B:2-345 [130152]
   automatically matched to d1k5dc_
   complexed with so4

Details for d2ca6b1

PDB Entry: 2ca6, 2.2 Å

PDB Description: miras structure determination from hemihedrally twinned crystals

PDB Compounds: (B:) ran gtpase-activating protein 1

SCOP Domain Sequences for d2ca6b1:

Sequence; same for both SEQRES and ATOM records:

>d2ca6b1 c.10.1.2 (B:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
arfsiegkslkldaittedeksvfavlleddsvkeivlsgntigteaarwlseniaskkd
leiaefsdiftgrvkdeipealrlllqallkcpklhtvrlsdnafgptaqeplidflskh
tplehlylhnnglgpqagakiaralqelavnkkaknapplrsiicgrnrlengsmkewak
tfqshrllhtvkmvqngirpegiehllleglaycqelkvldlqdntfthlgssalaialk
swpnlrelglndcllsargaaavvdafskleniglqtlrlqyneieldavrtlktvidek
mpdllflelngnrfseeddvvdeirevfstrgrgeldelddmee

Timeline for d2ca6b1:

• d2ca6b1 is new in SCOP 1.73
  
• d2ca6b1 appears in SCOP 1.75
  
• d2ca6b1 appears in the current release, SCOPe 2.08, called d2ca6b_