SCOPe 2.01: Domain d2c5rf_: 2c5r F:

Lineage for d2c5rf_ (2c5r F:)

1. Root: SCOPe 2.01

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.251: Phage replication organizer domain [140712] (1 superfamily)
   6 helices, homodimer of 3-helical domains

4. Superfamily a.251.1: Phage replication organizer domain [140713] (1 family)
   DNA binding induces further oligomerization

5. Family a.251.1.1: Phage replication organizer domain [140714] (2 proteins)
   Pfam PF06720

6. Protein automated matches [190518] (1 species)
   not a true protein

7. Species Bacillus phage [TaxId:10756] [187475] (2 PDB entries)

8. Domain d2c5rf_: 2c5r F: [129949]
   Other proteins in same PDB: d2c5ra1
   automated match to d1zaea1
   protein/DNA complex

Details for d2c5rf_

PDB Entry: 2c5r, 2.9 Å

PDB Description: the structure of phage phi29 replication organizer protein p16.7 in complex with double stranded dna

PDB Compounds: (F:) early protein p16.7

SCOPe Domain Sequences for d2c5rf_:

Sequence; same for both SEQRES and ATOM records:

>d2c5rf_ a.251.1.1 (F:) automated matches {Bacillus phage [TaxId: 10756]}
nlsacevavldlyeqsniripsdiiedlvnqrlqseqevlnyietqrtywklenqkklyr
gslk

Timeline for d2c5rf_:

• d2c5rf_ first appeared in SCOP 1.73, called d2c5rf1
  
• d2c5rf_ was called d2c5rf1 in SCOP 1.75
  
• d2c5rf_ appears in SCOPe 2.02
  
• d2c5rf_ appears in the current release, SCOPe 2.08