Lineage for d2bgfb1 (2bgf B:1-76)

  1. Root: SCOP 1.75
  2. 849709Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 853596Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 853597Superfamily d.15.1: Ubiquitin-like [54236] (8 families) (S)
  5. 853598Family d.15.1.1: Ubiquitin-related [54237] (38 proteins)
    Pfam PF00240
  6. 853734Protein Ubiquitin [54238] (3 species)
  7. 853743Species Human (Homo sapiens) [TaxId:9606] [54239] (63 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 853832Domain d2bgfb1: 2bgf B:1-76 [128477]
    automatically matched to d1aara_

Details for d2bgfb1

PDB Entry: 2bgf (more details)

PDB Description: nmr structure of lys48-linked di-ubiquitin using chemical shift perturbation data together with rdcs and 15n-relaxation data
PDB Compounds: (B:) di-ubiquitin; synonym:ubiquitin

SCOP Domain Sequences for d2bgfb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2bgfb1 d.15.1.1 (B:1-76) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

SCOP Domain Coordinates for d2bgfb1:

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Timeline for d2bgfb1:

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d2bgfa1