Lineage for d2bgda1 (2bgd A:2-298)

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 698670Fold c.45: (Phosphotyrosine protein) phosphatases II [52798] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 4 strands, order 1423
  4. 698671Superfamily c.45.1: (Phosphotyrosine protein) phosphatases II [52799] (5 families) (S)
    share with the family I the common active site structure with a circularly permuted topology
  5. 698721Family c.45.1.2: Higher-molecular-weight phosphotyrosine protein phosphatases [52805] (6 proteins)
    has an extension to the beta-sheet of 3 antiparallel strands before strand 4
  6. 698752Protein Tyrosine phosphatase [52806] (7 species)
  7. 698753Species Human (Homo sapiens), 1B [TaxId:9606] [52807] (91 PDB entries)
  8. 698801Domain d2bgda1: 2bgd A:2-298 [128474]
    automatically matched to d1q1ma_
    complexed with cl, na, po4, t1d

Details for d2bgda1

PDB Entry: 2bgd (more details), 2.4 Å

PDB Description: structure-based design of protein tyrosine phosphatase-1b inhibitors
PDB Compounds: (A:) protein-tyrosine phosphatase non-receptor type 1

SCOP Domain Sequences for d2bgda1:

Sequence, based on SEQRES records: (download)

>d2bgda1 c.45.1.2 (A:2-298) Tyrosine phosphatase {Human (Homo sapiens), 1B [TaxId: 9606]}
emekefeqidksgswaaiyqdirheasdfpcrvaklpknknrnryrdvspfdhsriklhq
edndyinaslikmeeaqrsyiltqgplpntcghfwemvweqksrgvvmlnrvmekgslkc
aqywpqkeekemifedtnlkltlisediksyytvrqlelenlttqetreilhfhyttwpd
fgvpespasflnflfkvresgslspehgpvvvhcsagigrsgtfcladtclllmdkrkdp
ssvdikkvllemrkfrmgliqtadqlrfsylaviegakfimgdssvqdqwkelshed

Sequence, based on observed residues (ATOM records): (download)

>d2bgda1 c.45.1.2 (A:2-298) Tyrosine phosphatase {Human (Homo sapiens), 1B [TaxId: 9606]}
emekefeqidksgswaaiyqdirheasdfpcrvaklpknknrnryrdvspfdhsriklhn
dyinaslikmeeaqrsyiltqgplpntcghfwemvweqksrgvvmlnrvmekgslkcaqy
wpqkeekemifedtnlkltlisediksyytvrqlelenlttqetreilhfhyttwpdfgv
pespasflnflfkvresgslspehgpvvvhcsagigrsgtfcladtclllmdkrkdpssv
dikkvllemrkfrmgliqtadqlrfsylaviegakfimgdssvqdqwkelshed

SCOP Domain Coordinates for d2bgda1:

Click to download the PDB-style file with coordinates for d2bgda1.
(The format of our PDB-style files is described here.)

Timeline for d2bgda1: