Lineage for d2be5o1 (2be5 O:2-96)

  1. Root: SCOP 1.75
  2. 758332Class a: All alpha proteins [46456] (284 folds)
  3. 778858Fold a.143: RPB6/omega subunit-like [63561] (1 superfamily)
    core: 2 helices and adjacent loops
  4. 778859Superfamily a.143.1: RPB6/omega subunit-like [63562] (2 families) (S)
    the bacterial omega and eukaryotic RPB6 subunits both function in polymerase assembly; the common core is involved in conserved interactions with other subunits
  5. 778860Family a.143.1.1: RNA polymerase omega subunit [63563] (1 protein)
    4 helices; irregular array
  6. 778861Protein RNA polymerase omega subunit [63564] (3 species)
  7. 778869Species Thermus thermophilus [TaxId:274] [74729] (9 PDB entries)
    Uniprot Q8RQE7; part of multichain biological unit
  8. 778879Domain d2be5o1: 2be5 O:2-96 [128367]
    Other proteins in same PDB: d2be5a1, d2be5a2, d2be5b1, d2be5b2, d2be5c1, d2be5d1, d2be5f1, d2be5f2, d2be5f3, d2be5k1, d2be5k2, d2be5l1, d2be5l2, d2be5m1, d2be5n1, d2be5p1, d2be5p2, d2be5p3
    automatically matched to d1iw7e_
    complexed with mg, tgt, zn

Details for d2be5o1

PDB Entry: 2be5 (more details), 2.4 Å

PDB Description: Crystal structure of the T. Thermophilus RNA polymerase holoenzyme in complex with inhibitor tagetitoxin
PDB Compounds: (O:) RNA polymerase omega chain

SCOP Domain Sequences for d2be5o1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2be5o1 a.143.1.1 (O:2-96) RNA polymerase omega subunit {Thermus thermophilus [TaxId: 274]}
aepgidklfgmvdskyrltvvvakraqqllrhgfkntvlepeerpkmqtleglfddpnae
twamkelltgrlvfgenlvpedrlqkemeriypge

SCOP Domain Coordinates for d2be5o1:

Click to download the PDB-style file with coordinates for d2be5o1.
(The format of our PDB-style files is described here.)

Timeline for d2be5o1: