SCOPe 2.08: Domain d1zjma3: 1zjm A:149-335

Lineage for d1zjma3 (1zjm A:149-335)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.218: Nucleotidyltransferase [81302] (1 superfamily)
   core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123

4. Superfamily d.218.1: Nucleotidyltransferase [81301] (16 families)

5. Family d.218.1.2: DNA polymerase beta-like [81300] (5 proteins)
   insert X in the core is an alpha-beta(2) unit; mixed 5-stranded sheet, order: 12543; contains extra C-terminal alpha+beta subdomain

6. Protein DNA polymerase beta, catalytic (31 kD) fragment [81578] (2 species)

7. Species Human (Homo sapiens) [TaxId:9606] [81574] (145 PDB entries)
   Uniprot P06746

8. Domain d1zjma3: 1zjm A:149-335 [125155]
   Other proteins in same PDB: d1zjma1, d1zjma2
   automated match to d1tv9a3
   protein/DNA complex; complexed with na

Details for d1zjma3

PDB Entry: 1zjm, 2.1 Å

PDB Description: Human DNA Polymerase beta complexed with DNA containing an A-A mismatched primer terminus

PDB Compounds: (A:) DNA polymerase beta

SCOPe Domain Sequences for d1zjma3:

Sequence, based on SEQRES records:

>d1zjma3 d.218.1.2 (A:149-335) DNA polymerase beta, catalytic (31 kD) fragment {Human (Homo sapiens) [TaxId: 9606]}
ripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqp
kllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycg
vlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyr
epkdrse

Sequence, based on observed residues (ATOM records):

>d1zjma3 d.218.1.2 (A:149-335) DNA polymerase beta, catalytic (31 kD) fragment {Human (Homo sapiens) [TaxId: 9606]}
ripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkll
hqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvly
ftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepk
drse

Timeline for d1zjma3:

• d1zjma3 first appeared in SCOP 1.73
  
• d1zjma3 appears in SCOPe 2.07