Lineage for d1z5la2 (1z5l A:8-185)

  1. Root: SCOPe 2.02
  2. 1190016Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1197982Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
    dimeric
  4. 1197983Superfamily d.19.1: MHC antigen-recognition domain [54452] (1 family) (S)
  5. 1197984Family d.19.1.1: MHC antigen-recognition domain [54453] (13 proteins)
  6. 1197985Protein CD1, alpha-1 and alpha-2 domains [54456] (4 species)
    Class I MHC-related
  7. 1198001Species Mouse (Mus musculus) [TaxId:10090] [54457] (7 PDB entries)
  8. 1198007Domain d1z5la2: 1z5l A:8-185 [124481]
    Other proteins in same PDB: d1z5la1, d1z5lb_, d1z5lc1, d1z5ld_
    automatically matched to d1cd1a2
    complexed with nag, pbs, r16

Details for d1z5la2

PDB Entry: 1z5l (more details), 2.2 Å

PDB Description: Structure of a highly potent short-chain galactosyl ceramide agonist bound to CD1D
PDB Compounds: (A:) T-cell surface glycoprotein CD1d antigen

SCOPe Domain Sequences for d1z5la2:

Sequence, based on SEQRES records: (download)

>d1z5la2 d.19.1.1 (A:8-185) CD1, alpha-1 and alpha-2 domains {Mouse (Mus musculus) [TaxId: 10090]}
ytfrclqmssfanrswsrtdsvvwlgdlqthrwsndsatisftkpwsqgklsnqqweklq
hmfqvyrvsftrdiqelvkmmspkedypieiqlsagcemypgnasesflhvafqgkyvvr
fwgtswqtvpgapswldlpikvlnadqgtsatvqmllndtcplfvrglleagksdlek

Sequence, based on observed residues (ATOM records): (download)

>d1z5la2 d.19.1.1 (A:8-185) CD1, alpha-1 and alpha-2 domains {Mouse (Mus musculus) [TaxId: 10090]}
ytfrclqmssfanrswsrtdsvvwlgdlqthrwsndsatisftkpwsqgklsnqqweklq
hmfqvyrvsftrdiqelvkmmspkedypieiqlsagcemypsesflhvafqgkyvvrfwg
tswqtvpgapswldlpikvlnadqgtsatvqmllndtcplfvrglleagksdlek

SCOPe Domain Coordinates for d1z5la2:

Click to download the PDB-style file with coordinates for d1z5la2.
(The format of our PDB-style files is described here.)

Timeline for d1z5la2: