Lineage for d1yymq2 (1yym Q:1108-1212)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 651987Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 651988Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 654118Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (23 proteins)
  6. 655938Protein Immunoglobulin light chain kappa constant domain, CL-kappa [88566] (3 species)
  7. 655939Species Human (Homo sapiens) [TaxId:9606] [88569] (125 PDB entries)
    including humanized antibodies (chimeric proteins with human constant domains)
  8. 655994Domain d1yymq2: 1yym Q:1108-1212 [124239]
    Other proteins in same PDB: d1yymg1, d1yymh1, d1yymh2, d1yyml1, d1yymp1, d1yymq1, d1yymr1, d1yymr2
    automatically matched to d1g9ml2
    complexed with edo, ipa, mpt, nag, ndg, vlm; mutant

Details for d1yymq2

PDB Entry: 1yym (more details), 2.2 Å

PDB Description: crystal structure of f23, a scorpion-toxin mimic of cd4, in complex with hiv-1 yu2 gp120 envelope glycoprotein and anti-hiv-1 antibody 17b
PDB Compounds: (Q:) Antibody 17B Light chain

SCOP Domain Sequences for d1yymq2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yymq2 b.1.1.2 (Q:1108-1212) Immunoglobulin light chain kappa constant domain, CL-kappa {Human (Homo sapiens) [TaxId: 9606]}

SCOP Domain Coordinates for d1yymq2:

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Timeline for d1yymq2: