SCOPe 2.03: Domain d1yx5b1: 1yx5 B:1-76

Lineage for d1yx5b1 (1yx5 B:1-76)

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (9 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Ubiquitin [54238] (7 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54239] (99 PDB entries)
   Uniprot P62988
   identical sequence in many other species

8. Domain d1yx5b1: 1yx5 B:1-76 [124172]
   automatically matched to d1aara_

Details for d1yx5b1

PDB Entry: 1yx5

PDB Description: solution structure of s5a uim-1/ubiquitin complex

PDB Compounds: (B:) Ubiquitin

SCOPe Domain Sequences for d1yx5b1:

Sequence; same for both SEQRES and ATOM records:

>d1yx5b1 d.15.1.1 (B:1-76) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

Timeline for d1yx5b1:

• d1yx5b1 first appeared in SCOP 1.73
  
• d1yx5b1 appears in SCOPe 2.02
  
• d1yx5b1 is called d1yx5b_ in SCOPe 2.04
  
• d1yx5b1 appears in the current release, SCOPe 2.08, called d1yx5b_