SCOPe 2.01: Domain d1yvib_: 1yvi B:

Lineage for d1yvib_ (1yvi B:)

1. Root: SCOPe 2.01

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.24: Four-helical up-and-down bundle [47161] (28 superfamilies)
   core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down

4. Superfamily a.24.10: Histidine-containing phosphotransfer domain, HPT domain [47226] (6 families)
   contains additional, fifth helix at the N-terminus

5. Family a.24.10.2: Phosphorelay protein-like [47230] (3 proteins)

6. Protein Histidine-containing phosphotransfer protein HP1 [140413] (1 species)

7. Species Rice (Oryza sativa) [TaxId:4530] [140414] (2 PDB entries)
   Uniprot Q6VAK4 2-143

8. Domain d1yvib_: 1yvi B: [124100]
   automated match to d1yvia1

Details for d1yvib_

PDB Entry: 1yvi, 2 Å

PDB Description: x-ray structure of putative histidine-containing phosphotransfer protein from rice, ak104879

PDB Compounds: (B:) histidine-containing phosphotransfer protein

SCOPe Domain Sequences for d1yvib_:

Sequence, based on SEQRES records:

>d1yvib_ a.24.10.2 (B:) Histidine-containing phosphotransfer protein HP1 {Rice (Oryza sativa) [TaxId: 4530]}
aaalrdqltallssmfsqglvdeqfqqlqmlqdeggtpgfvsevvtlfcddadriineia
tlleqpvvnfdkvdayvhqlkgssasvgaqkvkftcmqfrqfcqdksrdgclmalavvrn
dfydlrnkfqtmlqleqqiq

Sequence, based on observed residues (ATOM records):

>d1yvib_ a.24.10.2 (B:) Histidine-containing phosphotransfer protein HP1 {Rice (Oryza sativa) [TaxId: 4530]}
aaalrdqltallssmfsqglvdeqfqqlqmlqdpgfvsevvtlfcddadriineiatlle
qpvvnfdkvdayvhqlkgssasvgaqkvkftcmqfrqfcqdksrdgclmalavvrndfyd
lrnkfqtmlqleqqiq

Timeline for d1yvib_:

• d1yvib_ first appeared in SCOP 1.73, called d1yvib1
  
• d1yvib_ was called d1yvib1 in SCOP 1.75
  
• d1yvib_ appears in SCOPe 2.02
  
• d1yvib_ appears in the current release, SCOPe 2.08