SCOPe 2.08: Domain d1yj5c1: 1yj5 C:6-110

Lineage for d1yj5c1 (1yj5 C:6-110)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.26: SMAD/FHA domain [49878] (1 superfamily)
   sandwich; 11 strands in 2 sheets; greek-key

4. Superfamily b.26.1: SMAD/FHA domain [49879] (5 families)
   has a few short helices inserted in loops

5. Family b.26.1.2: FHA domain [49885] (12 proteins)

6. Protein Polynucleotide kinase 3'-phosphatase [101628] (2 species)

7. Species Mouse (Mus musculus) [TaxId:10090] [101629] (3 PDB entries)

8. Domain d1yj5c1: 1yj5 C:6-110 [123384]
   Other proteins in same PDB: d1yj5a1, d1yj5a2, d1yj5b1, d1yj5b2
   complexed with so4

Details for d1yj5c1

PDB Entry: 1yj5, 2.8 Å

PDB Description: Molecular architecture of mammalian polynucleotide kinase, a DNA repair enzyme

PDB Compounds: (C:) 5' polynucleotide kinase-3' phosphatase FHA domain

SCOPe Domain Sequences for d1yj5c1:

Sequence; same for both SEQRES and ATOM records:

>d1yj5c1 b.26.1.2 (C:6-110) Polynucleotide kinase 3'-phosphatase {Mouse (Mus musculus) [TaxId: 10090]}
srgrlwlqsptggpppiflpsdgqalvlgrgpltqvtdrkcsrnqveliadpesrtvavk
qlgvnpstvgvhelkpglsgslslgdvlylvnglypltlrweels

Timeline for d1yj5c1:

• d1yj5c1 first appeared in SCOP 1.73
  
• d1yj5c1 appears in SCOPe 2.07