SCOPe 2.08: Domain d1vqkb1: 1vqk B:1-337

Lineage for d1vqkb1 (1vqk B:1-337)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.43: Reductase/isomerase/elongation factor common domain [50412] (4 superfamilies)
   barrel, closed; n=6, S=10; greek-key

4. Superfamily b.43.3: Translation proteins [50447] (7 families)

5. Family b.43.3.2: Ribosomal protein L3 [50461] (1 protein)
   automatically mapped to Pfam PF00297

6. Protein Ribosomal protein L3 [50462] (4 species)
   superfamily fold is elaborated with additional structures

7. Species Haloarcula marismortui [TaxId:2238] [50463] (58 PDB entries)
   Uniprot P20279

8. Domain d1vqkb1: 1vqk B:1-337 [120247]
   Other proteins in same PDB: d1vqk11, d1vqk21, d1vqk31, d1vqka1, d1vqka2, d1vqkc1, d1vqkd1, d1vqke1, d1vqke2, d1vqkf1, d1vqkg1, d1vqkh1, d1vqki1, d1vqkj1, d1vqkk1, d1vqkl1, d1vqkm1, d1vqkn1, d1vqko1, d1vqkp1, d1vqkq1, d1vqkr1, d1vqks1, d1vqkt1, d1vqku1, d1vqkv1, d1vqkw1, d1vqkx1, d1vqky1, d1vqkz1
   automatically matched to d1jj2b_
   protein/RNA complex; complexed with cd, cl, k, mg, na, sr

Details for d1vqkb1

PDB Entry: 1vqk, 2.3 Å

PDB Description: the structure of ccda-phe-cap-bio bound to the a site of the ribosomal subunit of haloarcula marismortui

PDB Compounds: (B:) 50S ribosomal protein L3P

SCOPe Domain Sequences for d1vqkb1:

Sequence; same for both SEQRES and ATOM records:

>d1vqkb1 b.43.3.2 (B:1-337) Ribosomal protein L3 {Haloarcula marismortui [TaxId: 2238]}
pqpsrprkgslgfgprkrstsetprfnswpsddgqpgvqgfagykagmthvvlvndepns
pregmeetvpvtvietppmravalrayedtpygqrpltevwtdefhseldrtldvpedhd
pdaaeeqirdaheagdlgdlrlithtvpdavpsvpkkkpdvmetrvgggsvsdrldhald
ivedggehamndifrageyadvagvtkgkgtqgpvkrwgvqkrkgkharqgwrrrignlg
pwnpsrvrstvpqqgqtgyhqrtelnkrlidigegdeptvdggfvnygevdgpytlvkgs
vpgpdkrlvrfrpavrpndqprldpevryvsnesnqg

Timeline for d1vqkb1:

• d1vqkb1 first appeared in SCOP 1.73
  
• d1vqkb1 appears in SCOPe 2.07