SCOP 1.73: Domain d1vbrb1: 1vbr B:517-840

Lineage for d1vbrb1 (1vbr B:517-840)

1. Root: SCOP 1.73

2. Class c: Alpha and beta proteins (a/b) [51349] (141 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (14 families)

5. Family c.1.8.3: beta-glycanases [51487] (24 proteins)
   consist of a number of sequence families

6. Protein Xylanase [51488] (6 species)

7. Species Thermotoga maritima [TaxId:2336] [141772] (2 PDB entries)

8. Domain d1vbrb1: 1vbr B:517-840 [119962]
   automatically matched to 1VBR A:517-840
   complexed with acy, xyp, xys

Details for d1vbrb1

PDB Entry: 1vbr, 1.8 Å

PDB Description: crystal structure of complex xylanase 10b from thermotoga maritima with xylobiose

PDB Compounds: (B:) endo-1,4-beta-xylanase B

SCOP Domain Sequences for d1vbrb1:

Sequence; same for both SEQRES and ATOM records:

>d1vbrb1 c.1.8.3 (B:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]}
vslrelaeklniyigfaainnfwslsdaekymevarrefniltpenqmkwdtihperdry
nftpaekhvefaeendmivhghtlvwhnqlpgwitgrewtkeellnvledhiktvvshfk
grvkiwdvvneavsdsgtyresvwyktigpeyiekafrwakeadpdailiyndysieein
aksnfvynmikelkekgvpvdgigfqmhidyrglnydsfrrnlerfaklglqiyitemdv
riplsgseeyylkkqaevcakifdicldnpavkaiqfwgftdkyswvpgffkgygkallf
denynpkpcyyaikevlekkieer

Timeline for d1vbrb1:

• d1vbrb1 is new in SCOP 1.73
  
• d1vbrb1 appears in SCOP 1.75
  
• d1vbrb1 appears in the current release, SCOPe 2.08, called d1vbrb_