SCOPe 2.06: Domain d1uzdb2: 1uzd B:9-149

Lineage for d1uzdb2 (1uzd B:9-149)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.9: RuBisCO, large subunit, small (N-terminal) domain [54966] (2 families)
   C-terminal domain is beta/alpha barrel

5. Family d.58.9.1: Ribulose 1,5-bisphosphate carboxylase-oxygenase [54967] (1 protein)

6. Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [54968] (12 species)

7. Species Green alga (Chlamydomonas reinhardtii) [TaxId:3055] [69730] (4 PDB entries)

8. Domain d1uzdb2: 1uzd B:9-149 [119777]
   Other proteins in same PDB: d1uzda1, d1uzdb1, d1uzdc1, d1uzde1, d1uzdf_, d1uzdh1, d1uzdi_, d1uzdj_, d1uzdk1, d1uzdm_, d1uzdo1, d1uzdp_, d1uzdr1, d1uzdt_, d1uzdv1, d1uzdw_
   automated match to d1gk8a2
   complexed with cap, edo, mg

Details for d1uzdb2

PDB Entry: 1uzd, 2.4 Å

PDB Description: chlamydomonas,spinach chimeric rubisco

PDB Compounds: (B:) ribulose bisphosphate carboxylase large chain

SCOPe Domain Sequences for d1uzdb2:

Sequence; same for both SEQRES and ATOM records:

>d1uzdb2 d.58.9.1 (B:9-149) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]}
agagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaaesstgtwtt
vwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsivgnvfgfk
alralrledlrippayvktfv

Timeline for d1uzdb2:

• d1uzdb2 first appeared in SCOP 1.73
  
• d1uzdb2 appears in SCOPe 2.05
  
• d1uzdb2 appears in SCOPe 2.07
  
• d1uzdb2 appears in the current release, SCOPe 2.08