Lineage for Species: Enterococcus faecalis [TaxId: 1351]
- Root: SCOPe 2.04
Class d: Alpha and beta proteins (a+b) [53931] (380 folds) 
Fold d.142: ATP-grasp [56058] (2 superfamilies)
Consists of two subdomains with different alpha+beta folds
shares functional and structural similarities with the PIPK and protein kinase superfamilies
Superfamily d.142.2: DNA ligase/mRNA capping enzyme, catalytic domain [56091] (6 families) 
has a circularly permuted topology
Family d.142.2.2: Adenylation domain of NAD+-dependent DNA ligase [56096] (2 proteins)
automatically mapped to Pfam PF01653Protein Adenylation domain of NAD+-dependent DNA ligase [56097] (4 species)
contains additional, N-terminal all-alpha subdomainSpecies Enterococcus faecalis [TaxId:1351] [118124] (9 PDB entries)
Uniprot Q837V6 5-317
PDB entries in Species: Enterococcus faecalis [TaxId: 1351]:
- Domain(s) for 1ta8:
Domain d1ta8a_: 1ta8 A: [112375]
complexed with gol, nmn, so4
- Domain(s) for 1tae:
Domain d1taea_: 1tae A: [112376]
complexed with na, nad, so4
Domain d1taeb_: 1tae B: [112377]
complexed with na, nad, so4
Domain d1taec_: 1tae C: [112378]
complexed with na, nad, so4
Domain d1taed_: 1tae D: [112379]
complexed with na, nad, so4
- Domain(s) for 3ba8:
Domain d3ba8a_: 3ba8 A: [172514]
automated match to d1taea_
complexed with 3b8, nmn, so4
- Domain(s) for 3ba9:
Domain d3ba9a_: 3ba9 A: [172515]
automated match to d1taea_
complexed with 3b9, gol, nmn, so4
- Domain(s) for 3baa:
Domain d3baaa_: 3baa A: [172516]
automated match to d1taea_
complexed with 3ba, gol, nmn, so4
- Domain(s) for 3bab:
Domain d3baba_: 3bab A: [172517]
automated match to d1taea_
complexed with 3bd, gol, nmn, so4
- Domain(s) for 4eeq:
Domain d4eeqa_: 4eeq A: [220460]
automated match to d4efea_
protein/DNA complex; complexed with 0ox, nmn, so4
- Domain(s) for 4lh6:
Domain d4lh6a_: 4lh6 A: [235886]
automated match to d4lh7a_
complexed with 1x7, act, na, nmn
- Domain(s) for 4lh7:
Domain d4lh7a_: 4lh7 A: [230118]
automated match to d1taea_
complexed with 1x8, na, nmn
More info for Species Enterococcus faecalis [TaxId:1351] from d.142.2.2 Adenylation domain of NAD+-dependent DNA ligase
Timeline for Species Enterococcus faecalis [TaxId:1351] from d.142.2.2 Adenylation domain of NAD+-dependent DNA ligase:
- Species Enterococcus faecalis [TaxId:1351] from d.142.2.2 Adenylation domain of NAD+-dependent DNA ligase first appeared in SCOP 1.71
- Species Enterococcus faecalis [TaxId:1351] from d.142.2.2 Adenylation domain of NAD+-dependent DNA ligase appears in SCOPe 2.03
- Species Enterococcus faecalis [TaxId:1351] from d.142.2.2 Adenylation domain of NAD+-dependent DNA ligase appears in SCOPe 2.05
- Species Enterococcus faecalis [TaxId:1351] from d.142.2.2 Adenylation domain of NAD+-dependent DNA ligase appears in the current release, SCOPe 2.08