Lineage for d1xzqb1 (1xzq B:1-117)

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1447555Fold d.250: Folate-binding domain [103024] (1 superfamily)
    duplication: consists of two beta(2)-alpha-beta(3)-alpha subdomains swapped with the first strands
  4. 1447556Superfamily d.250.1: Folate-binding domain [103025] (2 families) (S)
    some topological similarity to Formylmethanofuran:tetrahydromethanopterin formyltransferase
  5. 1447591Family d.250.1.2: TrmE formyl-THF-binding domain [117997] (1 protein)
    dimeric biological unit; one subunit domain corresponds to one "unswapped" subdomain of the other family
    automatically mapped to Pfam PF10396
  6. 1447592Protein TrmE formyl-THF-binding domain [117998] (1 species)
  7. 1447593Species Thermotoga maritima [TaxId:2336] [117999] (2 PDB entries)
    Uniprot Q9WYA4
  8. 1447597Domain d1xzqb1: 1xzq B:1-117 [116261]
    Other proteins in same PDB: d1xzqa1, d1xzqa2
    protein/RNA complex; complexed with fon

Details for d1xzqb1

PDB Entry: 1xzq (more details), 2.9 Å

PDB Description: Structure of the GTP-binding protein TrmE from Thermotoga maritima complexed with 5-formyl-THF
PDB Compounds: (B:) Probable tRNA modification GTPase trmE

SCOPe Domain Sequences for d1xzqb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1xzqb1 d.250.1.2 (B:1-117) TrmE formyl-THF-binding domain {Thermotoga maritima [TaxId: 2336]}
mdtivavatppgkgaiailrlsgpdswkivqkhlrtrskivprkaihgwihengedvdev
vvvfykspksytgedmvevmchggplvvkklldlflksgarmaepgeftkraflngk

SCOPe Domain Coordinates for d1xzqb1:

Click to download the PDB-style file with coordinates for d1xzqb1.
(The format of our PDB-style files is described here.)

Timeline for d1xzqb1: