Lineage for d1xiwh_ (1xiw H:)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2352459Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2352460Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2352461Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2352672Protein Immunoglobulin heavy chain variable domain, VH [88543] (22 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 2353188Species Mouse (Mus musculus), cluster 3.2 [TaxId:10090] [88552] (184 PDB entries)
    Uniprot P01756 1-117 # 78% sequense identity; HV12_MOUSE Ig heavy chain V region MOPC 104E ! SQ NA # humanized antibody ! Uniprot P01750 # HV06_MOUSE Ig heavy chain V region 102 precursor ! Uniprot P01750 20-116 # ! HV06_MOUSE Ig heavy chain V region 102 precursor
  8. 2353210Domain d1xiwh_: 1xiw H: [115374]
    Other proteins in same PDB: d1xiwa_, d1xiwb_, d1xiwc_, d1xiwe_, d1xiwf_, d1xiwg_

Details for d1xiwh_

PDB Entry: 1xiw (more details), 1.9 Å

PDB Description: crystal structure of human cd3-e/d dimer in complex with a ucht1 single-chain antibody fragment
PDB Compounds: (H:) immunoglobulin heavy chain variable region

SCOPe Domain Sequences for d1xiwh_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1xiwh_ b.1.1.1 (H:) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}
evqlqqsgpelvkpgasmkisckasgysftgytmnwvkqshgknlewmglinpykgvsty
nqkfkdkatltvdkssstaymellsltsedsavyycarsgyygdsdwyfdvwgqgttltv
fs

SCOPe Domain Coordinates for d1xiwh_:

Click to download the PDB-style file with coordinates for d1xiwh_.
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Timeline for d1xiwh_: