Lineage for d1vb8a_ (1vb8 A:)

  1. Root: SCOPe 2.08
  2. 3029608Class g: Small proteins [56992] (100 folds)
  3. 3029893Fold g.3: Knottins (small inhibitors, toxins, lectins) [57015] (19 superfamilies)
    disulfide-bound fold; contains beta-hairpin with two adjacent disulfides
  4. 3030211Superfamily g.3.3: Cyclotides [57038] (4 families) (S)
    macrocyclic plant knottins closed with the formation of an Asn-Gly peptide
  5. 3030235Family g.3.3.2: Cycloviolacin [57042] (2 proteins)
    automatically mapped to Pfam PF03784
  6. 3030240Protein Root cyclotide 1 [118231] (1 species)
  7. 3030241Species Australian violet (Viola hederacea) [TaxId:180952] [118232] (1 PDB entry)
    Uniprot P83937
  8. 3030242Domain d1vb8a_: 1vb8 A: [113606]
    by homology with the Kalata B1 linear precursor, the mature protein sequence probably begins at Gly28 and ends at Asn27

Details for d1vb8a_

PDB Entry: 1vb8 (more details)

PDB Description: solution structure of vhr1, the first cyclotide from root tissue
PDB Compounds: (A:) Viola hederacea root peptide 1

SCOPe Domain Sequences for d1vb8a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vb8a_ g.3.3.2 (A:) Root cyclotide 1 {Australian violet (Viola hederacea) [TaxId: 180952]}

SCOPe Domain Coordinates for d1vb8a_:

Click to download the PDB-style file with coordinates for d1vb8a_.
(The format of our PDB-style files is described here.)

Timeline for d1vb8a_: