SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Family d.159.1.7: YfcE-like

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2206306Fold d.159: Metallo-dependent phosphatases [56299] (1 superfamily)
    4 layers: alpha/beta/beta/alpha; mixed beta sheets; contains duplication
  4. 2206307Superfamily d.159.1: Metallo-dependent phosphatases [56300] (13 families) (S)
    different families of this superfamily are groupped in a single Pfam family, Pfam PF00149
  5. 2206544Family d.159.1.7: YfcE-like [111233] (5 protein domains)

Protein Domains:

  1. 2206545Phosphodiesterase yfcE [111236] (1 species)
  2. 2206551Putative phosphodiesterase MJ0936 [111234] (1 species)
  3. 2206559Uncharacterized protein SP1879 [160873] (1 species)
  4. 2206562Vacuolar protein sorting 29, VPS29 [143935] (3 species)
    1. 2206563Species Cryptosporidium parvum [TaxId:5807] [143937] (1 PDB entry)
      Uniprot Q5CYJ7 5-197
    2. 2206566Species Human (Homo sapiens) [TaxId:9606] [160872] (2 PDB entries)
    3. 2206570Species Mouse (Mus musculus) [TaxId:10090] [143936] (5 PDB entries)
      Uniprot Q9QZ88 1-182
  5. 2206581automated matches [254477] (2 species)
    not a true protein
    1. 2206582Species Methanocaldococcus jannaschii [TaxId:2190] [255030] (1 PDB entry)
    2. 2283627Species Homo sapiens [TaxId:9606] [326928] (1 PDB entry)

More info for Family d.159.1.7: YfcE-like

Timeline for Family d.159.1.7: YfcE-like: