Lineage for Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2510574Fold d.32: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase [54592] (1 superfamily)
    beta-alpha-beta(3); 2 layers: alpha/beta
  4. 2510575Superfamily d.32.1: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase [54593] (11 families) (S)
  5. 2510736Family d.32.1.3: Extradiol dioxygenases [54602] (5 proteins)
    duplication: consists of 2 similar domains with 2 repeats in each
    Similar to the Methylmalonyl-CoA epimerase dimer
  6. 2510774Protein 4-hydroxyphenylpyruvate dioxygenase, HppD [54608] (6 species)
  7. 2510806Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [110877] (13 PDB entries)
    Uniprot P93836 33-428 ! Uniprot P93836 63-459

PDB entries in Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]:

  1. Domain(s) for 1sp9:
    1. 2510813Domain d1sp9a1: 1sp9 A:33-232 [238534]
      complexed with fe2
    2. 2510814Domain d1sp9a2: 1sp9 A:233-428 [238535]
      complexed with fe2
    3. 2510815Domain d1sp9b1: 1sp9 B:33-193 [238536]
      automated match to d1tg5a1
      complexed with fe2
    4. 2510816Domain d1sp9b2: 1sp9 B:202-437 [238537]
      automated match to d1tg5a2
      complexed with fe2
  2. Domain(s) for 1sqd:
    1. 2510811Domain d1sqda1: 1sqd A:14-195 [105906]
      complexed with fe
    2. 2510812Domain d1sqda2: 1sqd A:196-410 [105907]
      complexed with fe
  3. Domain(s) for 1tfz:
    1. 2510807Domain d1tfza1: 1tfz A:15-195 [106886]
      complexed with 869, fe
    2. 2510808Domain d1tfza2: 1tfz A:196-408 [106887]
      complexed with 869, fe
  4. Domain(s) for 1tg5:
    1. 2510809Domain d1tg5a1: 1tg5 A:14-195 [106890]
      complexed with 645, fe2
    2. 2510810Domain d1tg5a2: 1tg5 A:196-410 [106891]
      complexed with 645, fe2
  5. Domain(s) for 5dhw:
    1. 2510817Domain d5dhwa1: 5dhw A:30-232 [322180]
      automated match to d1sp9a1
      complexed with 5bq, fe
    2. 2510818Domain d5dhwa2: 5dhw A:233-434 [322181]
      automated match to d1sp9a2
      complexed with 5bq, fe
    3. 2510819Domain d5dhwb1: 5dhw B:30-232 [322160]
      automated match to d1sp9a1
      complexed with 5bq, fe
    4. 2510820Domain d5dhwb2: 5dhw B:233-436 [322161]
      automated match to d1sp9a2
      complexed with 5bq, fe
  6. Domain(s) for 5xgk:
    1. 3057743Domain d5xgka1: 5xgk A:29-232 [357805]
      automated match to d1sp9a1
      complexed with act, fe, tyf
    2. 3057744Domain d5xgka2: 5xgk A:233-437 [357806]
      automated match to d1sp9a2
      complexed with act, fe, tyf
    3. 3057745Domain d5xgkd1: 5xgk D:30-232 [357807]
      automated match to d1sp9a1
      complexed with act, fe, tyf
    4. 3057746Domain d5xgkd2: 5xgk D:233-436 [357808]
      automated match to d1sp9a2
      complexed with act, fe, tyf
    5. 3057758Domain d5xgkc1: 5xgk C:30-232 [357820]
      automated match to d1sp9a1
      complexed with act, fe, tyf
    6. 3057759Domain d5xgkc2: 5xgk C:233-439 [357821]
      automated match to d1sp9a2
      complexed with act, fe, tyf
    7. 3057762Domain d5xgkb1: 5xgk B:30-232 [357824]
      automated match to d1sp9a1
      complexed with act, fe, tyf
    8. 3057763Domain d5xgkb2: 5xgk B:233-434 [357825]
      automated match to d1sp9a2
      complexed with act, fe, tyf
  7. Domain(s) for 5ywg:
    1. 3062447Domain d5ywga1: 5ywg A:29-232 [362509]
      automated match to d1sp9a1
      complexed with 92l, co
    2. 3062448Domain d5ywga2: 5ywg A:233-434 [362510]
      automated match to d1sp9a2
      complexed with 92l, co
    3. 3062520Domain d5ywgb1: 5ywg B:29-232 [362582]
      automated match to d1sp9a1
      complexed with 92l, co
    4. 3062521Domain d5ywgb2: 5ywg B:233-434 [362583]
      automated match to d1sp9a2
      complexed with 92l, co
  8. Domain(s) for 5ywh:
    1. 3062475Domain d5ywhb1: 5ywh B:29-232 [362537]
      automated match to d1sp9a1
      complexed with 92u, fe
    2. 3062476Domain d5ywhb2: 5ywh B:233-434 [362538]
      automated match to d1sp9a2
      complexed with 92u, fe
    3. 3062539Domain d5ywha1: 5ywh A:29-232 [362601]
      automated match to d1sp9a1
      complexed with 92u, fe
    4. 3062540Domain d5ywha2: 5ywh A:233-434 [362602]
      automated match to d1sp9a2
      complexed with 92u, fe
  9. Domain(s) for 5ywi:
    1. 3062440Domain d5ywia1: 5ywi A:36-232 [362502]
      automated match to d5dhwa1
      complexed with co, ntd; mutant
    2. 3062441Domain d5ywia2: 5ywi A:233-431 [362503]
      automated match to d5dhwa2
      complexed with co, ntd; mutant
  10. Domain(s) for 5ywk:
    1. 3062518Domain d5ywka1: 5ywk A:29-232 [362580]
      automated match to d1sp9a1
      complexed with 92x, co
    2. 3062519Domain d5ywka2: 5ywk A:233-434 [362581]
      automated match to d1sp9a2
      complexed with 92x, co
    3. 3062545Domain d5ywkb1: 5ywk B:29-232 [362607]
      automated match to d1sp9a1
      complexed with 92x, co
    4. 3062546Domain d5ywkb2: 5ywk B:233-434 [362608]
      automated match to d1sp9a2
      complexed with 92x, co
  11. Domain(s) for 5yy6:
    1. 3062483Domain d5yy6a1: 5yy6 A:35-232 [362545]
      automated match to d5dhwa1
      complexed with 94l, co; mutant
    2. 3062484Domain d5yy6a2: 5yy6 A:233-432 [362546]
      automated match to d5dhwa2
      complexed with 94l, co; mutant
  12. Domain(s) for 6isd:
    1. 3060629Domain d6isdb1: 6isd B:30-232 [360691]
      automated match to d1sp9a1
      complexed with 5bq, co
    2. 3060630Domain d6isdb2: 6isd B:233-436 [360692]
      automated match to d1sp9a2
      complexed with 5bq, co
    3. 3060634Domain d6isda1: 6isd A:30-232 [360696]
      automated match to d1sp9a1
      complexed with 5bq, co
    4. 3060635Domain d6isda2: 6isd A:233-434 [360697]
      automated match to d1sp9a2
      complexed with 5bq, co
  13. Domain(s) for 6j63:
    1. 3064509Domain d6j63c1: 6j63 C:30-232 [364571]
      automated match to d1sp9a1
      complexed with fe, ntd
    2. 3064510Domain d6j63c2: 6j63 C:233-434 [364572]
      automated match to d1sp9a2
      complexed with fe, ntd
    3. 3064513Domain d6j63d1: 6j63 D:30-232 [364575]
      automated match to d1sp9a1
      complexed with fe, ntd
    4. 3064514Domain d6j63d2: 6j63 D:233-434 [364576]
      automated match to d1sp9a2
      complexed with fe, ntd
    5. 3064531Domain d6j63b1: 6j63 B:30-232 [364593]
      automated match to d1sp9a1
      complexed with fe, ntd
    6. 3064532Domain d6j63b2: 6j63 B:233-434 [364594]
      automated match to d1sp9a2
      complexed with fe, ntd
    7. 3064587Domain d6j63a1: 6j63 A:30-232 [364649]
      automated match to d1sp9a1
      complexed with fe, ntd
    8. 3064588Domain d6j63a2: 6j63 A:233-434 [364650]
      automated match to d1sp9a2
      complexed with fe, ntd

More info for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from d.32.1.3 4-hydroxyphenylpyruvate dioxygenase, HppD

Timeline for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from d.32.1.3 4-hydroxyphenylpyruvate dioxygenase, HppD: