Lineage for Species: Archaeon Methanococcus jannaschii

  1. Root: SCOP 1.71
  2. 570216Class c: Alpha and beta proteins (a/b) [51349] (134 folds)
  3. 570217Fold c.1: TIM beta/alpha-barrel [51350] (32 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 570872Superfamily c.1.6: PLP-binding barrel [51419] (2 families) (S)
    circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand
  5. 570873Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (3 proteins)
  6. 570900Protein Diaminopimelate decarboxylase LysA [89457] (3 species)
    most similar to eukaryotic ODC
  7. 570901Species Archaeon Methanococcus jannaschii [TaxId:2190] [110347] (2 PDB entries)

PDB entries in Species: Archaeon Methanococcus jannaschii:

  1. Domain(s) for 1tuf:
    1. 570906Domain d1tufa2: 1tuf A:50-313 [107336]
      Other proteins in same PDB: d1tufa1, d1tufb1
    2. 570907Domain d1tufb2: 1tuf B:50-313 [107338]
      Other proteins in same PDB: d1tufa1, d1tufb1
      Structural genomics target
      complexed with az1
  2. Domain(s) for 1twi:
    1. 570902Domain d1twia2: 1twi A:50-313 [107400]
      Other proteins in same PDB: d1twia1, d1twib1, d1twic1, d1twid1
    2. 570903Domain d1twib2: 1twi B:50-313 [107402]
      Other proteins in same PDB: d1twia1, d1twib1, d1twic1, d1twid1
    3. 570904Domain d1twic2: 1twi C:50-313 [107404]
      Other proteins in same PDB: d1twia1, d1twib1, d1twic1, d1twid1
    4. 570905Domain d1twid2: 1twi D:50-313 [107406]
      Other proteins in same PDB: d1twia1, d1twib1, d1twic1, d1twid1
      Structural genomics target
      complexed with lys, mg, plp

More info for Species Archaeon Methanococcus jannaschii [TaxId:2190] from c.1.6.1 Diaminopimelate decarboxylase LysA

Timeline for Species Archaeon Methanococcus jannaschii [TaxId:2190] from c.1.6.1 Diaminopimelate decarboxylase LysA: