Class b: All beta proteins [48724] (178 folds) |
Fold b.34: SH3-like barrel [50036] (21 superfamilies) barrel, partly opened; n*=4, S*=8; meander the last strand is interrupted by a turn of 3-10 helix |
Superfamily b.34.9: Tudor/PWWP/MBT [63748] (5 families) |
Family b.34.9.1: Tudor domain [63749] (8 proteins) Pfam PF00567 |
Protein p53-binding protein 1, 53BP1 [110163] (1 species) duplication; contains two Tudor domains in tandem |
Human (Homo sapiens) [TaxId:9606] [110164] (18 PDB entries) Uniprot Q12888 1485-1602 ! Uniprot Q12888 1484-1606 |
Domain d1ssfa1: 1ssf A:7-60 [105982] |
Domain d1ssfa2: 1ssf A:61-129 [105983] |
Domain d1xnia1: 1xni A:1485-1537 [115582] |
Domain d1xnia2: 1xni A:1538-1602 [115583] |
Domain d1xnib1: 1xni B:1485-1537 [115584] |
Domain d1xnib2: 1xni B:1538-1602 [115585] |
Domain d1xnic1: 1xni C:1485-1537 [115586] |
Domain d1xnic2: 1xni C:1538-1602 [115587] |
Domain d1xnid1: 1xni D:1485-1537 [115588] |
Domain d1xnid2: 1xni D:1538-1602 [115589] |
Domain d1xnie1: 1xni E:1485-1537 [115590] |
Domain d1xnie2: 1xni E:1538-1602 [115591] |
Domain d1xnif1: 1xni F:1485-1537 [115592] |
Domain d1xnif2: 1xni F:1538-1602 [115593] |
Domain d1xnig1: 1xni G:1485-1537 [115594] |
Domain d1xnig2: 1xni G:1538-1602 [115595] |
Domain d1xnih1: 1xni H:1485-1537 [115596] |
Domain d1xnih2: 1xni H:1538-1602 [115597] |
Domain d1xnii1: 1xni I:1485-1537 [115598] |
Domain d1xnii2: 1xni I:1538-1602 [115599] |
Domain d1xnij1: 1xni J:1485-1537 [115600] |
Domain d1xnij2: 1xni J:1538-1602 [115601] |
Domain d2g3ra1: 2g3r A:1485-1537 [134570] automated match to d1ssfa1 complexed with so4 |
Domain d2g3ra2: 2g3r A:1538-1603 [134571] automated match to d1ssfa2 complexed with so4 |
Domain d2ig0a1: 2ig0 A:1485-1537 [137350] automated match to d1ssfa1 protein/DNA complex; complexed with so4 |
Domain d2ig0a2: 2ig0 A:1538-1603 [137351] automated match to d1ssfa2 protein/DNA complex; complexed with so4 |
Domain d2lvma1: 2lvm A:1484-1537 [243008] Other proteins in same PDB: d2lvma3 automated match to d1ssfa1 |
Domain d2lvma2: 2lvm A:1538-1603 [243009] Other proteins in same PDB: d2lvma3 automated match to d1ssfa2 |
Domain d4rg2a1: 4rg2 A:1485-1537 [260428] Other proteins in same PDB: d4rg2b3 automated match to d1ssfa1 complexed with 3oo, edo, unx |
Domain d4rg2a2: 4rg2 A:1538-1603 [260429] Other proteins in same PDB: d4rg2b3 automated match to d1ssfa2 complexed with 3oo, edo, unx |
Domain d4rg2b1: 4rg2 B:1483-1537 [263863] Other proteins in same PDB: d4rg2b3 automated match to d1ssfa1 complexed with 3oo, edo, unx |
Domain d4rg2b2: 4rg2 B:1538-1602 [263864] Other proteins in same PDB: d4rg2b3 automated match to d1ssfa2 complexed with 3oo, edo, unx |
Domain d5j26a1: 5j26 A:1487-1537 [327156] Other proteins in same PDB: d5j26b_ automated match to d2lvma1 |
Domain d5j26a2: 5j26 A:1538-1603 [327157] Other proteins in same PDB: d5j26b_ automated match to d1ssfa2 |
Domain d5z78c1: 5z78 C:1484-1537 [353324] Other proteins in same PDB: d5z78a1, d5z78a2, d5z78b_, d5z78c3 automated match to d2lvma1 protein/DNA complex |
Domain d5z78c2: 5z78 C:1538-1603 [353325] Other proteins in same PDB: d5z78a1, d5z78a2, d5z78b_, d5z78c3 automated match to d1ssfa2 protein/DNA complex |
Domain d5zcjc1: 5zcj C:1486-1537 [354061] Other proteins in same PDB: d5zcja_, d5zcjb_ automated match to d2lvma1 |
Domain d5zcjc2: 5zcj C:1538-1606 [354062] Other proteins in same PDB: d5zcja_, d5zcjb_ automated match to d1ssfa2 |
Domain d6co1e1: 6co1 E:1484-1537 [353224] Other proteins in same PDB: d6co1a_, d6co1b_, d6co1c_, d6co1d_ automated match to d2lvma1 protein/DNA complex |
Domain d6co1e2: 6co1 E:1538-1603 [353225] Other proteins in same PDB: d6co1a_, d6co1b_, d6co1c_, d6co1d_ automated match to d1ssfa2 protein/DNA complex |
Domain d6co1f1: 6co1 F:1485-1537 [353233] Other proteins in same PDB: d6co1a_, d6co1b_, d6co1c_, d6co1d_ automated match to d2lvma1 protein/DNA complex |
Domain d6co1f2: 6co1 F:1538-1603 [353234] Other proteins in same PDB: d6co1a_, d6co1b_, d6co1c_, d6co1d_ automated match to d1ssfa2 protein/DNA complex |
Domain d6co2c1: 6co2 C:1485-1537 [353193] automated match to d2lvma1 protein/RNA complex |
Domain d6co2c2: 6co2 C:1538-1602 [353194] automated match to d1ssfa2 protein/RNA complex |
Domain d6co2d1: 6co2 D:1486-1537 [353198] automated match to d2lvma1 protein/RNA complex |
Domain d6co2d2: 6co2 D:1538-1603 [353199] automated match to d1ssfa2 protein/RNA complex |
Domain d6mxxa1: 6mxx A:1484-1537 [377420] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxa2: 6mxx A:1538-1603 [377421] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxb1: 6mxx B:1484-1537 [377477] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxb2: 6mxx B:1538-1602 [377478] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxc1: 6mxx C:1484-1537 [377390] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxc2: 6mxx C:1538-1602 [377391] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxd1: 6mxx D:1484-1537 [377388] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxd2: 6mxx D:1538-1603 [377389] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxe1: 6mxx E:1484-1537 [377415] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxe2: 6mxx E:1538-1603 [377416] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxf1: 6mxx F:1484-1537 [377437] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxf2: 6mxx F:1538-1603 [377438] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxg1: 6mxx G:1484-1537 [377464] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxg2: 6mxx G:1538-1602 [377465] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxh1: 6mxx H:1484-1537 [377407] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxh2: 6mxx H:1538-1602 [377408] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxi1: 6mxx I:1485-1537 [377444] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxi2: 6mxx I:1538-1602 [377445] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxj1: 6mxx J:1484-1537 [377399] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxxj2: 6mxx J:1538-1602 [377400] Other proteins in same PDB: d6mxxc3, d6mxxj3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6p, po4 |
Domain d6mxya1: 6mxy A:1484-1537 [377379] Other proteins in same PDB: d6mxya3, d6mxyb3 automated match to d2lvma1 protein/DNA complex; complexed with k6m, po4 |
Domain d6mxya2: 6mxy A:1538-1603 [377380] Other proteins in same PDB: d6mxya3, d6mxyb3 automated match to d1ssfa2 protein/DNA complex; complexed with k6m, po4 |
Domain d6mxyb1: 6mxy B:1484-1537 [377376] Other proteins in same PDB: d6mxya3, d6mxyb3 automated match to d2lvma1 protein/DNA complex; complexed with k6m, po4 |
Domain d6mxyb2: 6mxy B:1538-1603 [377377] Other proteins in same PDB: d6mxya3, d6mxyb3 automated match to d1ssfa2 protein/DNA complex; complexed with k6m, po4 |
Domain d6mxza1: 6mxz A:1485-1537 [377405] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxza2: 6mxz A:1538-1603 [377406] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxzb1: 6mxz B:1484-1537 [377417] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxzb2: 6mxz B:1538-1603 [377418] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxzc1: 6mxz C:1484-1537 [377449] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxzc2: 6mxz C:1538-1602 [377450] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxzd1: 6mxz D:1484-1537 [377432] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxzd2: 6mxz D:1538-1603 [377433] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxze1: 6mxz E:1484-1537 [377409] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxze2: 6mxz E:1538-1602 [377410] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxzf1: 6mxz F:1485-1537 [377468] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxzf2: 6mxz F:1538-1603 [377469] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxzg1: 6mxz G:1484-1537 [377402] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxzg2: 6mxz G:1538-1603 [377403] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxzh1: 6mxz H:1484-1537 [377393] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxzh2: 6mxz H:1538-1602 [377394] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxzi1: 6mxz I:1484-1537 [377422] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxzi2: 6mxz I:1538-1603 [377423] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxzj1: 6mxz J:1485-1537 [377396] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d2lvma1 protein/DNA complex; complexed with fmt, k6s |
Domain d6mxzj2: 6mxz J:1538-1602 [377397] Other proteins in same PDB: d6mxze3, d6mxzg3 automated match to d1ssfa2 protein/DNA complex; complexed with fmt, k6s |
Domain d6my0a1: 6my0 A:1484-1537 [377372] Other proteins in same PDB: d6my0a3 automated match to d2lvma1 mutant |
Domain d6my0a2: 6my0 A:1538-1603 [377373] Other proteins in same PDB: d6my0a3 automated match to d1ssfa2 mutant |
Domain d6my0b1: 6my0 B:1485-1537 [377370] Other proteins in same PDB: d6my0a3 automated match to d2lvma1 mutant |
Domain d6my0b2: 6my0 B:1538-1602 [377371] Other proteins in same PDB: d6my0a3 automated match to d1ssfa2 mutant |
Domain d6upta1: 6upt A:1485-1537 [377194] automated match to d2lvma1 complexed with qfm, unx |
Domain d6upta2: 6upt A:1538-1603 [377195] automated match to d1ssfa2 complexed with qfm, unx |
Domain d6uptb1: 6upt B:1486-1537 [377199] automated match to d2lvma1 complexed with qfm, unx |
Domain d6uptb2: 6upt B:1538-1605 [377200] automated match to d1ssfa2 complexed with qfm, unx |
Domain d6va5a1: 6va5 A:1484-1537 [384852] automated match to d2lvma1 complexed with gol, qss, so4, unx |
Domain d6va5a2: 6va5 A:1538-1606 [384853] automated match to d1ssfa2 complexed with gol, qss, so4, unx |
Domain d6vipa1: 6vip A:1485-1537 [380597] automated match to d2lvma1 complexed with qxy, unx |
Domain d6vipa2: 6vip A:1538-1604 [380598] automated match to d1ssfa2 complexed with qxy, unx |
Domain d6vipb1: 6vip B:1484-1537 [380587] automated match to d2lvma1 complexed with qxy, unx |
Domain d6vipb2: 6vip B:1538-1604 [380588] automated match to d1ssfa2 complexed with qxy, unx |
Timeline for Protein p53-binding protein 1, 53BP1 from b.34.9.1: Tudor domain: