SCOPe 2.06: Protein: Trigger factor, C-terminal domain

Lineage for Protein: Trigger factor, C-terminal domain

Root: SCOPe 2.06
Class a: All alpha proteins [46456] (289 folds)
Fold a.223: Triger factor/SurA peptide-binding domain-like [109997] (1 superfamily)
multihelical; irregular array of long and short helices

Superfamily a.223.1: Triger factor/SurA peptide-binding domain-like [109998] (3 families)

there are sequence and functional similarities between the families, but their structural similarity is obscured by conformational flexibility (in the TF family)

Family a.223.1.1: TF C-terminus [109999] (1 protein)
Pfam PF05698; includes the upstream linker region not covered by the Pfam model
Protein Trigger factor, C-terminal domain [110000] (2 species)

Species:

Escherichia coli [TaxId:562] [110001] (2 PDB entries)
Uniprot P22257
1. Domains for 1w26:
  1. Domain d1w26a1: 1w26 A:248-432 [109085]
    Other proteins in same PDB: d1w26a2, d1w26a3, d1w26b2, d1w26b3
  2. Domain d1w26b1: 1w26 B:248-432 [109088]
    Other proteins in same PDB: d1w26a2, d1w26a3, d1w26b2, d1w26b3
2. Domain for 2vrh:
  - Domain d2vrha1: 2vrh A:248-431 [153506]
    Other proteins in same PDB: d2vrha2, d2vrha3, d2vrhb1, d2vrhc1, d2vrhd1
    automatically matched to d1w26a1
    protein/RNA complex
Vibrio cholerae [TaxId:666] [110002] (1 PDB entry)
Uniprot Q9KQS5
- Domains for 1t11:
  1. Domain d1t11a1: 1t11 A:248-376 [106236]
    Other proteins in same PDB: d1t11a2, d1t11a3, d1t11a4, d1t11b2, d1t11b3, d1t11b4
  2. Domain d1t11b1: 1t11 B:248-376 [106239]
    Other proteins in same PDB: d1t11a2, d1t11a3, d1t11a4, d1t11b2, d1t11b3, d1t11b4

More info for Protein Trigger factor, C-terminal domain from a.223.1.1: TF C-terminus

Timeline for Protein Trigger factor, C-terminal domain from a.223.1.1: TF C-terminus:

Protein Trigger factor, C-terminal domain from a.223.1.1: TF C-terminus first appeared in SCOP 1.69, called Protein Trigger factor, C-terminal domain from a.223.1.1: TF C-terminus (Pfam 05698)
Protein Trigger factor, C-terminal domain from a.223.1.1: TF C-terminus appears in SCOPe 2.05
Protein Trigger factor, C-terminal domain from a.223.1.1: TF C-terminus appears in SCOPe 2.07
Protein Trigger factor, C-terminal domain from a.223.1.1: TF C-terminus appears in the current release, SCOPe 2.08