SCOPe 2.01: Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Lineage for Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Root: SCOPe 2.01
Class a: All alpha proteins [46456] (284 folds)
Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families)
contains a small beta-sheet (wing)
Family a.4.5.54: Vacuolar sorting protein domain [109692] (3 proteins)
duplication: tandem repeat of two "winged-helix" domains
Protein Vacuolar protein sorting-associated protein VPS25 [109697] (1 species)
Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [109698] (3 PDB entries)
Uniprot P47142

PDB entries in Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]:

Domain(s) for 1u5t:
1. Domain d1u5tc1: 1u5t C:2-125 [107688]
  Other proteins in same PDB: d1u5ta1, d1u5ta2, d1u5tb1, d1u5tb2
2. Domain d1u5tc2: 1u5t C:126-199 [107689]
  Other proteins in same PDB: d1u5ta1, d1u5ta2, d1u5tb1, d1u5tb2
3. Domain d1u5td1: 1u5t D:2-125 [107690]
  Other proteins in same PDB: d1u5ta1, d1u5ta2, d1u5tb1, d1u5tb2
4. Domain d1u5td2: 1u5t D:126-199 [107691]
  Other proteins in same PDB: d1u5ta1, d1u5ta2, d1u5tb1, d1u5tb2
Domain(s) for 1w7p:
1. Domain d1w7pb1: 1w7p B:1-125 [114321]
  Other proteins in same PDB: d1w7pa1, d1w7pa2, d1w7pd1, d1w7pd2
2. Domain d1w7pb2: 1w7p B:126-199 [114322]
  Other proteins in same PDB: d1w7pa1, d1w7pa2, d1w7pd1, d1w7pd2
3. Domain d1w7pc1: 1w7p C:1-125 [114323]
  Other proteins in same PDB: d1w7pa1, d1w7pa2, d1w7pd1, d1w7pd2
4. Domain d1w7pc2: 1w7p C:126-199 [114324]
  Other proteins in same PDB: d1w7pa1, d1w7pa2, d1w7pd1, d1w7pd2
Domain(s) for 1xb4:
1. Domain d1xb4a1: 1xb4 A:2-125 [121832]
  automatically matched to d1u5tc1
2. Domain d1xb4a2: 1xb4 A:126-199 [121833]
  automatically matched to d1u5tc2
3. Domain d1xb4b1: 1xb4 B:2-125 [121834]
  automatically matched to d1u5tc1
4. Domain d1xb4b2: 1xb4 B:126-199 [121835]
  automatically matched to d1u5tc2
5. Domain d1xb4c1: 1xb4 C:3-125 [121836]
  automatically matched to d1u5tc1
6. Domain d1xb4c2: 1xb4 C:126-199 [121837]
  automatically matched to d1u5tc2
7. Domain d1xb4d1: 1xb4 D:2-125 [121838]
  automatically matched to d1u5tc1
8. Domain d1xb4d2: 1xb4 D:126-199 [121839]
  automatically matched to d1u5tc2

More info for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from a.4.5.54 Vacuolar protein sorting-associated protein VPS25

Timeline for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from a.4.5.54 Vacuolar protein sorting-associated protein VPS25:

Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from a.4.5.54 Vacuolar protein sorting-associated protein VPS25 first appeared in SCOP 1.69
Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from a.4.5.54 Vacuolar protein sorting-associated protein VPS25 appears in SCOP 1.75
Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from a.4.5.54 Vacuolar protein sorting-associated protein VPS25 appears in SCOPe 2.02
Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from a.4.5.54 Vacuolar protein sorting-associated protein VPS25 appears in the current release, SCOPe 2.08