SCOPe 2.06: Family a.4.5.54: Vacuolar sorting protein domain

Lineage for Family a.4.5.54: Vacuolar sorting protein domain

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
   core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down

4. Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families)
   contains a small beta-sheet (wing)

5. Family a.4.5.54: Vacuolar sorting protein domain [109692] (3 proteins)
   duplication: tandem repeat of two "winged-helix" domains

Proteins:

1. Vacuolar protein sorting-associated protein VPS25 [109697] (1 species)

   • Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [109698] (3 PDB entries)
     Uniprot P47142

2. Vacuolar protein sorting-associated protein VPS36 [109695] (1 species)

   • Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [109696] (2 PDB entries)
     Uniprot Q06696 396-566

3. Vacuolar sorting protein SNF8 [109693] (1 species)

   • Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [109694] (2 PDB entries)
     Uniprot Q12483 20-232

More info for Family a.4.5.54: Vacuolar sorting protein domain

Timeline for Family a.4.5.54: Vacuolar sorting protein domain:

• Family a.4.5.54: Vacuolar sorting protein domain first appeared in SCOP 1.69
  
• Family a.4.5.54: Vacuolar sorting protein domain appears in SCOPe 2.05
  
• Family a.4.5.54: Vacuolar sorting protein domain appears in SCOPe 2.07
  
• Family a.4.5.54: Vacuolar sorting protein domain appears in the current release, SCOPe 2.08