Lineage for d1wdaa1 (1wda A:113-293)

  1. Root: SCOP 1.75
  2. 781541Class b: All beta proteins [48724] (174 folds)
  3. 789808Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (10 superfamilies)
    sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
  4. 790349Superfamily b.2.9: Peptidylarginine deiminase Pad4, middle domain [110083] (1 family) (S)
  5. 790350Family b.2.9.1: Peptidylarginine deiminase Pad4, middle domain [110084] (1 protein)
  6. 790351Protein Peptidylarginine deiminase Pad4, middle domain [110085] (1 species)
  7. 790352Species Human (Homo sapiens) [TaxId:9606] [110086] (7 PDB entries)
    Uniprot Q9UM07
  8. 790357Domain d1wdaa1: 1wda A:113-293 [109243]
    Other proteins in same PDB: d1wdaa2, d1wdaa3
    complexed with bag, ca, so4; mutant

Details for d1wdaa1

PDB Entry: 1wda (more details), 2.3 Å

PDB Description: crystal structure of human peptidylarginine deiminase type4 (pad4) in complex with benzoyl-l-arginine amide
PDB Compounds: (A:) Protein-arginine deiminase type IV

SCOP Domain Sequences for d1wdaa1:

Sequence, based on SEQRES records: (download)

>d1wdaa1 b.2.9.1 (A:113-293) Peptidylarginine deiminase Pad4, middle domain {Human (Homo sapiens) [TaxId: 9606]}
veislcaditrtgkvkptravkdqrtwtwgpcgqgaillvncdrdnlessamdceddevl
dsedlqdmslmtlstktpkdfftnhtlvlhvarsemdkvrvfqatrgklsskcsvvlgpk
wpshylmvpggkhnmdfyvealafpdtdfpglitltislldtsnlelpeavvfqdsvvfr
v

Sequence, based on observed residues (ATOM records): (download)

>d1wdaa1 b.2.9.1 (A:113-293) Peptidylarginine deiminase Pad4, middle domain {Human (Homo sapiens) [TaxId: 9606]}
veislcaditrtgkqrtwtwgpcgqgaillvncdrdnlessamdceddevldsedlqdms
lmtlstktpkdfftnhtlvlhvarsemdkvrvfqatcsvvlgpkwpshylmvpggkhnmd
fyvealafpdtdfpglitltislldtsnlelpeavvfqdsvvfrv

SCOP Domain Coordinates for d1wdaa1:

Click to download the PDB-style file with coordinates for d1wdaa1.
(The format of our PDB-style files is described here.)

Timeline for d1wdaa1: