SCOPe 2.01: Domain d1wd9a1: 1wd9 A:113-293

Lineage for d1wd9a1 (1wd9 A:113-293)

1. Root: SCOPe 2.01

2. Class b: All beta proteins [48724] (174 folds)

3. Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (10 superfamilies)
   sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold

4. Superfamily b.2.9: Peptidylarginine deiminase Pad4, middle domain [110083] (1 family)

5. Family b.2.9.1: Peptidylarginine deiminase Pad4, middle domain [110084] (1 protein)

6. Protein Peptidylarginine deiminase Pad4, middle domain [110085] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [110086] (7 PDB entries)
   Uniprot Q9UM07

8. Domain d1wd9a1: 1wd9 A:113-293 [109240]
   Other proteins in same PDB: d1wd9a2, d1wd9a3
   complexed with ca, so4

Details for d1wd9a1

PDB Entry: 1wd9, 2.6 Å

PDB Description: calcium bound form of human peptidylarginine deiminase type4 (pad4)

PDB Compounds: (A:) Protein-arginine deiminase type IV

SCOPe Domain Sequences for d1wd9a1:

Sequence, based on SEQRES records:

>d1wd9a1 b.2.9.1 (A:113-293) Peptidylarginine deiminase Pad4, middle domain {Human (Homo sapiens) [TaxId: 9606]}
veislcaditrtgkvkptravkdqrtwtwgpcgqgaillvncdrdnlessamdceddevl
dsedlqdmslmtlstktpkdfftnhtlvlhvarsemdkvrvfqatrgklsskcsvvlgpk
wpshylmvpggkhnmdfyvealafpdtdfpglitltislldtsnlelpeavvfqdsvvfr
v

Sequence, based on observed residues (ATOM records):

>d1wd9a1 b.2.9.1 (A:113-293) Peptidylarginine deiminase Pad4, middle domain {Human (Homo sapiens) [TaxId: 9606]}
veislcaditrtqrtwtwgpcgqgaillvncdrdnlessamdceddevldsedlqdmslm
tlstktpkdfftnhtlvlhvarsemdkvrvfqatcsvvlgpkwpshylmvpggkhnmdfy
vealafpdtdfpglitltislldtsnlelpeavvfqdsvvfrv

Timeline for d1wd9a1:

• d1wd9a1 first appeared in SCOP 1.69
  
• d1wd9a1 appears in SCOP 1.75
  
• d1wd9a1 appears in SCOPe 2.02
  
• d1wd9a1 appears in the current release, SCOPe 2.08