SCOPe 2.06: Domain d1vg1a_: 1vg1 A:

Lineage for d1vg1a_ (1vg1 A:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.8: G proteins [52592] (79 proteins)
   core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest

6. Protein Rab7 [110540] (2 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [110541] (4 PDB entries)
   Uniprot P09527

8. Domain d1vg1a_: 1vg1 A: [108599]
   complexed with gdp, mg

Details for d1vg1a_

PDB Entry: 1vg1, 1.9 Å

PDB Description: gdp-bound rab7

PDB Compounds: (A:) Ras-related protein Rab-7

SCOPe Domain Sequences for d1vg1a_:

Sequence, based on SEQRES records:

>d1vg1a_ c.37.1.8 (A:) Rab7 {Norway rat (Rattus norvegicus) [TaxId: 10116]}
kkvllkviilgdsgvgktslmnqyvnkkfsnqykatigadfltkevmvddrlvtmqiwdt
agqerfqslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpfvvlg
nkidlenrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqetevelyn
e

Sequence, based on observed residues (ATOM records):

>d1vg1a_ c.37.1.8 (A:) Rab7 {Norway rat (Rattus norvegicus) [TaxId: 10116]}
kkvllkviilgdsgvgktslmnqyvnkkfsadfltkevmvddrlvtmqiwdtslgvafyr
gadccvlvfdvtapntfktldswrdefliqasprdpenfpfvvlgnkidlenrqvatkra
qawcysknnipyfetsakeainveqafqtiarnalkqetevelyne

Timeline for d1vg1a_:

• d1vg1a_ first appeared in SCOP 1.69
  
• d1vg1a_ appears in SCOPe 2.05
  
• d1vg1a_ appears in SCOPe 2.07
  
• d1vg1a_ appears in the current release, SCOPe 2.08