Lineage for d1vfsb2 (1vfs B:1013-1249)

  1. Root: SCOP 1.75
  2. 814173Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 814174Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 815023Superfamily c.1.6: PLP-binding barrel [51419] (2 families) (S)
    circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand
  5. 815024Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (3 proteins)
  6. 815025Protein Alanine racemase [51421] (3 species)
  7. 815045Species Streptomyces lavendulae [TaxId:1914] [110346] (3 PDB entries)
    Uniprot Q65YW7
  8. 815047Domain d1vfsb2: 1vfs B:1013-1249 [108587]
    Other proteins in same PDB: d1vfsa1, d1vfsb1
    complexed with cl, scp

Details for d1vfsb2

PDB Entry: 1vfs (more details), 1.9 Å

PDB Description: Crystal structure of D-cycloserine-bound form of alanine racemase from D-cycloserine-producing Streptomyces lavendulae
PDB Compounds: (B:) alanine racemase

SCOP Domain Sequences for d1vfsb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vfsb2 c.1.6.1 (B:1013-1249) Alanine racemase {Streptomyces lavendulae [TaxId: 1914]}
dldavranvralraraprsalmavvksnayghgavpcaraaqeagaawlgtatpeealel
raagiqgrimcwlwtpggpwreaietdidvsvsgmwaldevraaaraagrtariqlkadt
glgrngcqpadwaelvgaavaaqaegtvqvtgvwshfacadepghpsirlqldafrdmla
yaekegvdpevrhianspatltlpethfdlvrtglavygvspspelgtpaqlglrpa

SCOP Domain Coordinates for d1vfsb2:

Click to download the PDB-style file with coordinates for d1vfsb2.
(The format of our PDB-style files is described here.)

Timeline for d1vfsb2:

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Domains from same chain:
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d1vfsb1