Lineage for d1tkda2 (1tkd A:211-704)

  1. Root: SCOPe 2.07
  2. 2568173Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)
  3. 2571153Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 2571154Superfamily e.8.1: DNA/RNA polymerases [56672] (8 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 2571155Family e.8.1.1: DNA polymerase I [56673] (5 proteins)
  6. 2571427Protein T7 phage DNA polymerase [56678] (1 species)
  7. 2571428Species Bacteriophage T7 [TaxId:10760] [56679] (17 PDB entries)
    Uniprot P00581
  8. 2571433Domain d1tkda2: 1tkd A:211-704 [107087]
    Other proteins in same PDB: d1tkda1, d1tkdb_
    protein/DNA complex; complexed with 1pe, d3t, mes, mg, so4

Details for d1tkda2

PDB Entry: 1tkd (more details), 2.49 Å

PDB Description: T7 DNA polymerase ternary complex with 8 oxo guanosine and dCMP at the elongation site
PDB Compounds: (A:) DNA polymerase

SCOPe Domain Sequences for d1tkda2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1tkda2 e.8.1.1 (A:211-704) T7 phage DNA polymerase {Bacteriophage T7 [TaxId: 10760]}
leavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkgg
temfchprtgkplpkypriktpkvggifkkpknkaqregrepceldtreyvagapytpve
hvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeyl
miqkrigqsaegdkawlryvaedgkihgsvnpngavtgrathafpnlaqipgvrspygeq
craafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknq
iaaelptrdnaktfiygflygagdekigqivgagkergkelkkkflentpaiaalresiq
qtlvessqwvageqqvkwkrrwikgldgrkvhvrsphaalntllqsagalicklwiikte
emlvekglkhgwdgdfaymawvhdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrcll
dtegkmgpnwaich

SCOPe Domain Coordinates for d1tkda2:

Click to download the PDB-style file with coordinates for d1tkda2.
(The format of our PDB-style files is described here.)

Timeline for d1tkda2:

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Domains from same chain:
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d1tkda1
View in 3D
Domains from other chains:
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d1tkdb_