SCOP 1.69: Domain d1smyl2: 1smy L:50-172

Lineage for d1smyl2 (1smy L:50-172)

1. Root: SCOP 1.69

2. Class d: Alpha and beta proteins (a+b) [53931] (279 folds)

3. Fold d.181: Insert subdomain of RNA polymerase alpha subunit [56552] (1 superfamily)
   unusual fold; contains a left-handed beta-alpha-beta unit

4. Superfamily d.181.1: Insert subdomain of RNA polymerase alpha subunit [56553] (1 family)

5. Family d.181.1.1: Insert subdomain of RNA polymerase alpha subunit [56554] (2 proteins)

6. Protein RNA polymerase alpha subunit [56555] (3 species)

7. Species Thermus thermophilus [TaxId:274] [75595] (2 PDB entries)

8. Domain d1smyl2: 1smy L:50-172 [105787]
   Other proteins in same PDB: d1smya1, d1smyb1, d1smyc_, d1smyd_, d1smye_, d1smyf1, d1smyf2, d1smyf3, d1smyk1, d1smyl1, d1smym_, d1smyn_, d1smyo_, d1smyp1, d1smyp2, d1smyp3

Details for d1smyl2

PDB Entry: 1smy, 2.7 Å

PDB Description: Structural basis for transcription regulation by alarmone ppGpp

SCOP Domain Sequences for d1smyl2:

Sequence; same for both SEQRES and ATOM records:

>d1smyl2 d.181.1.1 (L:50-172) RNA polymerase alpha subunit {Thermus thermophilus}
gtavtsvyiedvlhefstipgvkedvveiilnlkelvvrflnpslqtvtlllkaegpkev
kardflpvadveimnpdlhiatleeggrlnmevrvdrgvgyvpaekhgikdrinaipvda
vfs

Timeline for d1smyl2:

• d1smyl2 is new in SCOP 1.69
  
• d1smyl2 appears in SCOP 1.71
  
• d1smyl2 appears in the current release, SCOPe 2.08