SCOPe 2.08: Domain d1skwa1: 1skw A:1-210

Lineage for d1skwa1 (1skw A:1-210)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
   3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest

4. Superfamily c.55.3: Ribonuclease H-like [53098] (18 families)
   consists of one domain of this fold

5. Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (17 proteins)
   contains Pfam PF00929

6. Protein Exonuclease domain of T7 DNA polymerase [53123] (1 species)

7. Species Bacteriophage T7 [TaxId:10760] [53124] (17 PDB entries)
   Uniprot P00581

8. Domain d1skwa1: 1skw A:1-210 [105694]
   Other proteins in same PDB: d1skwa2, d1skwb_
   protein/DNA complex; complexed with mg

Details for d1skwa1

PDB Entry: 1skw, 2.3 Å

PDB Description: Binary 3' complex of T7 DNA polymerase with a DNA primer/template containing a disordered cis-syn thymine dimer on the template

PDB Compounds: (A:) DNA polymerase

SCOPe Domain Sequences for d1skwa1:

Sequence; same for both SEQRES and ATOM records:

>d1skwa1 c.55.3.5 (A:1-210) Exonuclease domain of T7 DNA polymerase {Bacteriophage T7 [TaxId: 10760]}
mivsdieanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhn
ghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllrsgklpgale
awgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekll
sdkhyfppeidftdvgyttfwses

Timeline for d1skwa1:

• d1skwa1 first appeared in SCOP 1.69
  
• d1skwa1 appears in SCOPe 2.07