Lineage for d1qvod2 (1qvo D:1-181)

  1. Root: SCOP 1.73
  2. 713694Class d: Alpha and beta proteins (a+b) [53931] (334 folds)
  3. 719351Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
    dimeric
  4. 719352Superfamily d.19.1: MHC antigen-recognition domain [54452] (1 family) (S)
  5. 719353Family d.19.1.1: MHC antigen-recognition domain [54453] (12 proteins)
  6. 719393Protein Class I MHC, alpha-1 and alpha-2 domains [54468] (22 species)
  7. 719397Species Human (Homo sapiens), HLA-A11 [TaxId:9606] [110840] (4 PDB entries)
  8. 719401Domain d1qvod2: 1qvo D:1-181 [104600]
    Other proteins in same PDB: d1qvoa1, d1qvob_, d1qvod1, d1qvoe_

Details for d1qvod2

PDB Entry: 1qvo (more details), 2.22 Å

PDB Description: structures of hla-a*1101 in complex with immunodominant nonamer and decamer hiv-1 epitopes clearly reveal the presence of a middle anchor residue
PDB Compounds: (D:) HLA class I histocompatibility antigen, A-11 alpha chain

SCOP Domain Sequences for d1qvod2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1qvod2 d.19.1.1 (D:1-181) Class I MHC, alpha-1 and alpha-2 domains {Human (Homo sapiens), HLA-A11 [TaxId: 9606]}
gshsmryfytsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
dqetrnvkaqsqtdrvdlgtlrgyynqsedgshtiqimygcdvgpdgrflrgyrqdaydg
kdyialnedlrswtaadmaaqitkrkweaahaaeqqraylegrcvewlrrylengketlq
r

SCOP Domain Coordinates for d1qvod2:

Click to download the PDB-style file with coordinates for d1qvod2.
(The format of our PDB-style files is described here.)

Timeline for d1qvod2: