Lineage for d1q94d2 (1q94 D:1-181)

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1405985Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
    dimeric
  4. 1405986Superfamily d.19.1: MHC antigen-recognition domain [54452] (2 families) (S)
  5. 1405987Family d.19.1.1: MHC antigen-recognition domain [54453] (13 proteins)
  6. 1406058Protein Class I MHC, alpha-1 and alpha-2 domains [54468] (28 species)
  7. 1406062Species Human (Homo sapiens), HLA-A11 [TaxId:9606] [110840] (4 PDB entries)
    Uniprot P13746 25-299 # 1A11_HUMAN HLA class I histocompatibility antigen, A-11 alpha chain precursor
  8. 1406068Domain d1q94d2: 1q94 D:1-181 [104563]
    Other proteins in same PDB: d1q94a1, d1q94b_, d1q94d1, d1q94e_

Details for d1q94d2

PDB Entry: 1q94 (more details), 2.4 Å

PDB Description: structures of hla-a*1101 in complex with immunodominant nonamer and decamer hiv-1 epitopes clearly reveal the presence of a middle anchor residue
PDB Compounds: (D:) HLA class I histocompatibility antigen, A-11 alpha chain

SCOPe Domain Sequences for d1q94d2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1q94d2 d.19.1.1 (D:1-181) Class I MHC, alpha-1 and alpha-2 domains {Human (Homo sapiens), HLA-A11 [TaxId: 9606]}
gshsmryfytsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
dqetrnvkaqsqtdrvdlgtlrgyynqsedgshtiqimygcdvgpdgrflrgyrqdaydg
kdyialnedlrswtaadmaaqitkrkweaahaaeqqraylegrcvewlrrylengketlq
r

SCOPe Domain Coordinates for d1q94d2:

Click to download the PDB-style file with coordinates for d1q94d2.
(The format of our PDB-style files is described here.)

Timeline for d1q94d2: