Lineage for d1ppjn1 (1ppj N:2-233)

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1943314Fold d.185: LuxS/MPP-like metallohydrolase [63410] (1 superfamily)
    core: beta-alpha-beta(2)-alpha(2); 2 layers: alpha/beta
  4. 1943315Superfamily d.185.1: LuxS/MPP-like metallohydrolase [63411] (3 families) (S)
    Share the same "active site motif" HxxEH located in the first core helix, but differ in one of the zinc-binding residues
  5. 1943316Family d.185.1.1: MPP-like [63412] (7 proteins)
    Common fold elaborated with many additional structures; duplication: each family member consists of two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)-beta structure, but only the N-terminal domain of MPP beta chain binds the catalytic metal
  6. 1943317Protein Cytochrome bc1 core subunit 1 [63408] (3 species)
  7. 1943346Species Cow (Bos taurus) [TaxId:9913] [55997] (17 PDB entries)
    Uniprot P31800
  8. 1943353Domain d1ppjn1: 1ppj N:2-233 [104267]
    Other proteins in same PDB: d1ppjb1, d1ppjb2, d1ppjc1, d1ppjc2, d1ppjd1, d1ppjd2, d1ppje1, d1ppje2, d1ppjf_, d1ppjg_, d1ppjh_, d1ppji_, d1ppjj_, d1ppjo1, d1ppjo2, d1ppjp1, d1ppjp2, d1ppjq1, d1ppjq2, d1ppjr1, d1ppjr2, d1ppjs_, d1ppjt_, d1ppju_, d1ppjv_, d1ppjw_
    complexed with any, azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma

Details for d1ppjn1

PDB Entry: 1ppj (more details), 2.1 Å

PDB Description: bovine cytochrome bc1 complex with stigmatellin and antimycin
PDB Compounds: (N:) Ubiquinol-cytochrome C reductase complex core protein I, mitochondrial

SCOPe Domain Sequences for d1ppjn1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ppjn1 d.185.1.1 (N:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]}
atyaqalqsvpetqvsqldnglrvaseqssqptctvgvwidagsryeseknngagyfveh
lafkgtknrpgnalekevesmgahlnaystrehtayyikalskdlpkavelladivqncs
ledsqiekerdvilqelqendtsmrdvvfnylhatafqgtplaqsvegpsenvrklsrad
lteylsrhykaprmvlaaagglehrqlldlaqkhfsglsgtydedavptlsp

SCOPe Domain Coordinates for d1ppjn1:

Click to download the PDB-style file with coordinates for d1ppjn1.
(The format of our PDB-style files is described here.)

Timeline for d1ppjn1: