SCOPe 2.06: Family c.47.1.15: KaiB-like

Lineage for Family c.47.1.15: KaiB-like

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.47: Thioredoxin fold [52832] (2 superfamilies)
   core: 3 layers, a/b/a; mixed beta-sheet of 4 strands, order 4312; strand 3 is antiparallel to the rest

4. Superfamily c.47.1: Thioredoxin-like [52833] (24 families)

5. Family c.47.1.15: KaiB-like [102449] (3 proteins)
   Pfam PF07689; contains members with alternative folds

Proteins:

1. Adaptive-response sensory-kinase SasA, N-terminal domain [117596] (1 species)
   has a canonical thioredoxin fold

   • Species Synechococcus elongatus [TaxId:32046] [117597] (2 PDB entries)
     Uniprot Q06904 19-109 # 97% sequence identity

2. Circadian oscillation regulator KaiB [102450] (2 species)
   the differently folded C-terminal half facilitates oligomerization

   1. Species Cyanobacterium (Nostoc sp.) pcc 7120 [TaxId:1180] [102451] (1 PDB entry)

   2. Species Synechococcus elongatus [TaxId:1140] [254871] (1 PDB entry)

3. automated matches [190797] (3 species)
   not a true protein

   1. Species Synechococcus elongatus [TaxId:32046] [188470] (1 PDB entry)

   2. Species Synechocystis sp. [TaxId:1143] [188099] (1 PDB entry)

   3. Species Thermosynechococcus elongatus [TaxId:197221] [188059] (5 PDB entries)

More info for Family c.47.1.15: KaiB-like

Timeline for Family c.47.1.15: KaiB-like:

• Family c.47.1.15: KaiB-like first appeared in SCOP 1.67, called Family c.47.1.15: Circadian oscillation regulator KaiB
  
• Family c.47.1.15: KaiB-like appears in SCOPe 2.05
  
• Family c.47.1.15: KaiB-like appears in SCOPe 2.07
  
• Family c.47.1.15: KaiB-like appears in the current release, SCOPe 2.08