SCOPe 2.08: Superfamily c.129.1: MCP/YpsA-like

Lineage for Superfamily c.129.1: MCP/YpsA-like

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.129: MCP/YpsA-like [102404] (1 superfamily)
   3 layers: a/b/a, parallel beta-sheet of 7 strands, order 4321567

4. Superfamily c.129.1: MCP/YpsA-like [102405] (6 families)

Families:

1. c.129.1.1: MoCo carrier protein-like [102406] (7 proteins)
   Pfam PF03641

2. c.129.1.2: YpsA-like [159579] (1 protein)
   Pfam PF06908; DUF1273; lacking the last strand 7; different set of conserved residues in the putative active site than in the MoCo carrier protein-like family

3. c.129.1.3: SMF/DprA-LOG (SLOG) domain from TPRM channels [418830] (1 protein)
   Pfam PF18139 or Pfam PF18171; contains an extra N-terminal extension to the common fold with several more beta strands and helices

4. c.129.1.4: SLOG domain from DNA-Processing proteins [418834] (1 protein)
   Pfam PF02481

5. c.129.1.5: Circularly perumited SLOG domain [418835] (1 protein)
   Pfam PF12694

6. c.129.1.0: automated matches [233357] (1 protein)
   not a true family

More info for Superfamily c.129.1: MCP/YpsA-like

Timeline for Superfamily c.129.1: MCP/YpsA-like:

• Superfamily c.129.1: MCP/YpsA-like first appeared in SCOP 1.67, called Superfamily c.129.1: Putative lysine decarboxylase
  
• Superfamily c.129.1: MCP/YpsA-like appears in SCOPe 2.07