SCOPe 2.08: Protein: Shank1, PDZ domain

Lineage for Protein: Shank1, PDZ domain

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)
Fold b.36: PDZ domain-like [50155] (1 superfamily)
contains barrel, partly opened; n*=4, S*=8; meander; capped by alpha-helix
Superfamily b.36.1: PDZ domain-like [50156] (7 families)
peptide-binding domain
Family b.36.1.1: PDZ domain [50157] (47 proteins)
Pfam PF00595
Protein Shank1, PDZ domain [101733] (2 species)
SH3 and multiple ankyrin repeat domains protein 1

Species:

Human (Homo sapiens) [TaxId:9606] [401374] (2 PDB entries)
1. Domains for 6ywz:
  1. Domain d6ywza1: 6ywz A:654-758 [401384]
    Other proteins in same PDB: d6ywza2, d6ywzb2
    automated match to d1q3ob_
    complexed with arg, leu, peg, pwn, thr
  2. Domain d6ywzb1: 6ywz B:654-759 [401375]
    Other proteins in same PDB: d6ywza2, d6ywzb2
    automated match to d1q3ob_
    complexed with arg, leu, peg, pwn, thr
2. Domains for 6yx1:
  1. Domain d6yx1a1: 6yx1 A:654-758 [401475]
    Other proteins in same PDB: d6yx1a2, d6yx1b2
    automated match to d1q3ob_
    complexed with arg, leu, pwt, thr
  2. Domain d6yx1b1: 6yx1 B:654-759 [401435]
    Other proteins in same PDB: d6yx1a2, d6yx1b2
    automated match to d1q3ob_
    complexed with arg, leu, pwt, thr
Norway rat (Rattus norvegicus) [TaxId:10116] [101734] (5 PDB entries)
1. Domains for 1q3o:
  1. Domain d1q3oa_: 1q3o A: [95700]
    complexed with br
  2. Domain d1q3ob_: 1q3o B: [95701]
    complexed with br
2. Domains for 1q3p:
  1. Domain d1q3pa_: 1q3p A: [95702]
  2. Domain d1q3pb_: 1q3p B: [95703]
3. Domain for 3l4f:
  - Domain d3l4fd1: 3l4f D:653-758 [212739]
    Other proteins in same PDB: d3l4fd2
    automated match to d1q3pb_
4. Domains for 3qjm:
  1. Domain d3qjma_: 3qjm A: [184441]
    automated match to d1q3ob_
  2. Domain d3qjmb_: 3qjm B: [184442]
    automated match to d1q3ob_
5. Domains for 3qjn:
  1. Domain d3qjna_: 3qjn A: [184443]
    automated match to d1q3ob_
  2. Domain d3qjnb_: 3qjn B: [184444]
    automated match to d1q3ob_
  3. Domain d3qjnc_: 3qjn C: [184445]
    automated match to d1q3ob_
  4. Domain d3qjnd_: 3qjn D: [184446]
    automated match to d1q3ob_
  5. Domain d3qjne_: 3qjn E: [184447]
    automated match to d1q3ob_
  6. Domain d3qjnf_: 3qjn F: [184448]
    automated match to d1q3ob_
  7. Domain d3qjng_: 3qjn G: [184449]
    automated match to d1q3ob_
  8. Domain d3qjnh_: 3qjn H: [184450]
    automated match to d1q3ob_

More info for Protein Shank1, PDZ domain from b.36.1.1: PDZ domain

Timeline for Protein Shank1, PDZ domain from b.36.1.1: PDZ domain:

Protein Shank1, PDZ domain from b.36.1.1: PDZ domain first appeared in SCOP 1.67
Protein Shank1, PDZ domain from b.36.1.1: PDZ domain appears in SCOPe 2.07