Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

  1. Root: SCOPe 2.02
  2. 1103260Class b: All beta proteins [48724] (174 folds)
  3. 1103261Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1103262Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 1103263Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 1105202Protein Immunoglobulin light chain lambda variable domain, VL-lambda [88534] (9 species)
    VL-lambda domains of human antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the human genome; mouse VL-lambda domains belong to a single germline family
  7. 1105343Species Norway rat (Rattus norvegicus) [TaxId:10116] [101504] (8 PDB entries)

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

  1. Domain(s) for 1oaq:
  2. Domain(s) for 1oar:
    1. 1105349Domain d1oarl_: 1oar L: [92713]
      Other proteins in same PDB: d1oarh_, d1oari_, d1oarj_, d1oark_
      part of IgE Fv spe-7
      complexed with azn, cac, cl, dms, edo, na
    2. 1105350Domain d1oarm_: 1oar M: [92714]
      Other proteins in same PDB: d1oarh_, d1oari_, d1oarj_, d1oark_
      part of IgE Fv spe-7
      complexed with azn, cac, cl, dms, edo, na
    3. 1105351Domain d1oarn_: 1oar N: [92715]
      Other proteins in same PDB: d1oarh_, d1oari_, d1oarj_, d1oark_
      part of IgE Fv spe-7
      complexed with azn, cac, cl, dms, edo, na
    4. 1105352Domain d1oaro_: 1oar O: [92716]
      Other proteins in same PDB: d1oarh_, d1oari_, d1oarj_, d1oark_
      part of IgE Fv spe-7
      complexed with azn, cac, cl, dms, edo, na
  3. Domain(s) for 1oau:
    1. 1105345Domain d1oaul_: 1oau L: [92721]
      Other proteins in same PDB: d1oauh_, d1oaui_, d1oauj_, d1oauk_
      part of IgE Fv spe-7
      complexed with dnf, imd, ser
    2. 1105346Domain d1oaum_: 1oau M: [92722]
      Other proteins in same PDB: d1oauh_, d1oaui_, d1oauj_, d1oauk_
      part of IgE Fv spe-7
      complexed with dnf, imd, ser
    3. 1105347Domain d1oaun_: 1oau N: [92723]
      Other proteins in same PDB: d1oauh_, d1oaui_, d1oauj_, d1oauk_
      part of IgE Fv spe-7
      complexed with dnf, imd, ser
    4. 1105348Domain d1oauo_: 1oau O: [92724]
      Other proteins in same PDB: d1oauh_, d1oaui_, d1oauj_, d1oauk_
      part of IgE Fv spe-7
      complexed with dnf, imd, ser
  4. Domain(s) for 1oax:
    1. 1105355Domain d1oaxl_: 1oax L: [92729]
      Other proteins in same PDB: d1oaxh_, d1oaxj_
      part of IgE Fv spe-7
      complexed with anq
    2. 1105356Domain d1oaxm_: 1oax M: [92730]
      Other proteins in same PDB: d1oaxh_, d1oaxj_
      part of IgE Fv spe-7
      complexed with anq
    3. 1105357Domain d1oaxn_: 1oax N: [92731]
      Other proteins in same PDB: d1oaxh_, d1oaxj_
      part of IgE Fv spe-7
      complexed with anq
    4. 1105358Domain d1oaxo_: 1oax O: [92732]
      Other proteins in same PDB: d1oaxh_, d1oaxj_
      part of IgE Fv spe-7
      complexed with anq
  5. Domain(s) for 1oay:
    1. 1105359Domain d1oayl_: 1oay L: [92737]
      Other proteins in same PDB: d1oayh_, d1oayj_
      part of IgE Fv spe-7
      complexed with fur
    2. 1105360Domain d1oaym_: 1oay M: [92738]
      Other proteins in same PDB: d1oayh_, d1oayj_
      part of IgE Fv spe-7
      complexed with fur
    3. 1105361Domain d1oayn_: 1oay N: [92739]
      Other proteins in same PDB: d1oayh_, d1oayj_
      part of IgE Fv spe-7
      complexed with fur
    4. 1105362Domain d1oayo_: 1oay O: [92740]
      Other proteins in same PDB: d1oayh_, d1oayj_
      part of IgE Fv spe-7
      complexed with fur
  6. Domain(s) for 1oaz:
    1. 1105363Domain d1oazl_: 1oaz L: [92745]
      Other proteins in same PDB: d1oaza_, d1oazb_, d1oazh_, d1oazj_
      part of IgE Fv spe-7
    2. 1105364Domain d1oazn_: 1oaz N: [92746]
      Other proteins in same PDB: d1oaza_, d1oazb_, d1oazh_, d1oazj_
      part of IgE Fv spe-7
  7. Domain(s) for 1ocw:
  8. Domain(s) for 2bjm:

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.1.1.1 Immunoglobulin light chain lambda variable domain, VL-lambda

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.1.1.1 Immunoglobulin light chain lambda variable domain, VL-lambda: