Lineage for Species: Rat (Rattus norvegicus)

  1. Root: SCOP 1.67
  2. 362614Class b: All beta proteins [48724] (141 folds)
  3. 362615Fold b.1: Immunoglobulin-like beta-sandwich [48725] (22 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 362616Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 362617Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (24 proteins)
  6. 364057Protein Immunoglobulin light chain lambda variable domain, VL-lambda [88534] (9 species)
    VL-lambda domains of human antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the human genome; mouse VL-lambda domains belong to a single germline family
  7. 364181Species Rat (Rattus norvegicus) [TaxId:10116] [101504] (7 PDB entries)

PDB entries in Species: Rat (Rattus norvegicus):

  1. Domain(s) for 1oaq:
  2. Domain(s) for 1oar:
    1. 364187Domain d1oarl_: 1oar L: [92713]
      Other proteins in same PDB: d1oarh_, d1oari_, d1oarj_, d1oark_
    2. 364188Domain d1oarm_: 1oar M: [92714]
      Other proteins in same PDB: d1oarh_, d1oari_, d1oarj_, d1oark_
    3. 364189Domain d1oarn_: 1oar N: [92715]
      Other proteins in same PDB: d1oarh_, d1oari_, d1oarj_, d1oark_
    4. 364190Domain d1oaro_: 1oar O: [92716]
      Other proteins in same PDB: d1oarh_, d1oari_, d1oarj_, d1oark_
      part of IgE Fv spe-7
      complexed with azn, cac, cl, dms, edo, na
  3. Domain(s) for 1oau:
    1. 364183Domain d1oaul_: 1oau L: [92721]
      Other proteins in same PDB: d1oauh_, d1oaui_, d1oauj_, d1oauk_
    2. 364184Domain d1oaum_: 1oau M: [92722]
      Other proteins in same PDB: d1oauh_, d1oaui_, d1oauj_, d1oauk_
    3. 364185Domain d1oaun_: 1oau N: [92723]
      Other proteins in same PDB: d1oauh_, d1oaui_, d1oauj_, d1oauk_
    4. 364186Domain d1oauo_: 1oau O: [92724]
      Other proteins in same PDB: d1oauh_, d1oaui_, d1oauj_, d1oauk_
      part of IgE Fv spe-7
      complexed with dnf, imd, ser
  4. Domain(s) for 1oax:
    1. 364192Domain d1oaxl_: 1oax L: [92729]
      Other proteins in same PDB: d1oaxh_, d1oaxi_, d1oaxj_, d1oaxk_
    2. 364193Domain d1oaxm_: 1oax M: [92730]
      Other proteins in same PDB: d1oaxh_, d1oaxi_, d1oaxj_, d1oaxk_
    3. 364194Domain d1oaxn_: 1oax N: [92731]
      Other proteins in same PDB: d1oaxh_, d1oaxi_, d1oaxj_, d1oaxk_
    4. 364195Domain d1oaxo_: 1oax O: [92732]
      Other proteins in same PDB: d1oaxh_, d1oaxi_, d1oaxj_, d1oaxk_
      part of IgE Fv spe-7
      complexed with anq
  5. Domain(s) for 1oay:
    1. 364196Domain d1oayl_: 1oay L: [92737]
      Other proteins in same PDB: d1oayh_, d1oayi_, d1oayj_, d1oayk_
    2. 364197Domain d1oaym_: 1oay M: [92738]
      Other proteins in same PDB: d1oayh_, d1oayi_, d1oayj_, d1oayk_
    3. 364198Domain d1oayn_: 1oay N: [92739]
      Other proteins in same PDB: d1oayh_, d1oayi_, d1oayj_, d1oayk_
    4. 364199Domain d1oayo_: 1oay O: [92740]
      Other proteins in same PDB: d1oayh_, d1oayi_, d1oayj_, d1oayk_
      part of IgE Fv spe-7
      complexed with fur
  6. Domain(s) for 1oaz:
    1. 364200Domain d1oazl_: 1oaz L: [92745]
      Other proteins in same PDB: d1oaza_, d1oazb_, d1oazh_, d1oazj_
    2. 364201Domain d1oazn_: 1oaz N: [92746]
      Other proteins in same PDB: d1oaza_, d1oazb_, d1oazh_, d1oazj_
      part of IgE Fv spe-7
  7. Domain(s) for 1ocw:

More info for Species Rat (Rattus norvegicus) [TaxId:10116] from b.1.1.1 Immunoglobulin light chain lambda variable domain, VL-lambda

Timeline for Species Rat (Rattus norvegicus) [TaxId:10116] from b.1.1.1 Immunoglobulin light chain lambda variable domain, VL-lambda:

  • Species Rat (Rattus norvegicus) [TaxId:10116] from b.1.1.1 Immunoglobulin light chain lambda variable domain, VL-lambda is new in SCOP 1.67
  • Species Rat (Rattus norvegicus) [TaxId:10116] from b.1.1.1 Immunoglobulin light chain lambda variable domain, VL-lambda appears in SCOP 1.69
  • Species Rat (Rattus norvegicus) [TaxId:10116] from b.1.1.1 Immunoglobulin light chain lambda variable domain, VL-lambda appears in the current release, SCOPe 2.07, called Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.1.1.1 Immunoglobulin light chain lambda variable domain, VL-lambda