Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.04
  2. 1473060Class a: All alpha proteins [46456] (285 folds)
  3. 1493397Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 1493774Superfamily a.60.6: DNA polymerase beta, N-terminal domain-like [47802] (2 families) (S)
    contains one classic and one pseudo HhH motifs
  5. 1493775Family a.60.6.1: DNA polymerase beta, N-terminal domain-like [47803] (3 proteins)
  6. 1493942Protein DNA polymerase lambda [101251] (1 species)
  7. 1493943Species Human (Homo sapiens) [TaxId:9606] [101252] (26 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 1nzp:
  2. Domain(s) for 1rzt:
    1. 1493957Domain d1rzta1: 1rzt A:249-328 [98224]
      Other proteins in same PDB: d1rzta2, d1rzta3, d1rzte2, d1rzte3, d1rzti2, d1rzti3, d1rztm2, d1rztm3
      protein/DNA complex; complexed with edo, na
    2. 1493958Domain d1rzte1: 1rzt E:250-328 [98227]
      Other proteins in same PDB: d1rzta2, d1rzta3, d1rzte2, d1rzte3, d1rzti2, d1rzti3, d1rztm2, d1rztm3
      protein/DNA complex; complexed with edo, na
    3. 1493959Domain d1rzti1: 1rzt I:250-328 [98230]
      Other proteins in same PDB: d1rzta2, d1rzta3, d1rzte2, d1rzte3, d1rzti2, d1rzti3, d1rztm2, d1rztm3
      protein/DNA complex; complexed with edo, na
    4. 1493960Domain d1rztm1: 1rzt M:249-328 [98233]
      Other proteins in same PDB: d1rzta2, d1rzta3, d1rzte2, d1rzte3, d1rzti2, d1rzti3, d1rztm2, d1rztm3
      protein/DNA complex; complexed with edo, na
  3. Domain(s) for 1xsl:
    1. 1493963Domain d1xsla1: 1xsl A:249-327 [122270]
      Other proteins in same PDB: d1xsla2, d1xsla3, d1xsle2, d1xsle3, d1xsli2, d1xsli3, d1xslm2, d1xslm3
      automatically matched to d1nzpa_
      protein/DNA complex; complexed with cac, mg, na
    2. 1493964Domain d1xsle1: 1xsl E:251-327 [122273]
      Other proteins in same PDB: d1xsla2, d1xsla3, d1xsle2, d1xsle3, d1xsli2, d1xsli3, d1xslm2, d1xslm3
      automatically matched to d1nzpa_
      protein/DNA complex; complexed with cac, mg, na
    3. 1493965Domain d1xsli1: 1xsl I:250-327 [122276]
      Other proteins in same PDB: d1xsla2, d1xsla3, d1xsle2, d1xsle3, d1xsli2, d1xsli3, d1xslm2, d1xslm3
      automatically matched to d1nzpa_
      protein/DNA complex; complexed with cac, mg, na
    4. 1493966Domain d1xslm1: 1xsl M:249-327 [122279]
      Other proteins in same PDB: d1xsla2, d1xsla3, d1xsle2, d1xsle3, d1xsli2, d1xsli3, d1xslm2, d1xslm3
      automatically matched to d1nzpa_
      protein/DNA complex; complexed with cac, mg, na
  4. Domain(s) for 1xsn:
  5. Domain(s) for 1xsp:
  6. Domain(s) for 2bcq:
  7. Domain(s) for 2gws:
    1. 1493970Domain d2gwsa1: 2gws A:249-328 [135813]
      Other proteins in same PDB: d2gwsa2, d2gwsa3, d2gwse2, d2gwse3, d2gwsi2, d2gwsi3, d2gwsm2, d2gwsm3
      automated match to d1rzta1
      protein/DNA complex; complexed with cac, cl, edo, mg, na
    2. 1493971Domain d2gwse1: 2gws E:250-328 [135816]
      Other proteins in same PDB: d2gwsa2, d2gwsa3, d2gwse2, d2gwse3, d2gwsi2, d2gwsi3, d2gwsm2, d2gwsm3
      automated match to d1rzta1
      protein/DNA complex; complexed with cac, cl, edo, mg, na
    3. 1493972Domain d2gwsi1: 2gws I:250-328 [135819]
      Other proteins in same PDB: d2gwsa2, d2gwsa3, d2gwse2, d2gwse3, d2gwsi2, d2gwsi3, d2gwsm2, d2gwsm3
      automated match to d1rzta1
      protein/DNA complex; complexed with cac, cl, edo, mg, na
    4. 1493973Domain d2gwsm1: 2gws M:250-328 [135822]
      Other proteins in same PDB: d2gwsa2, d2gwsa3, d2gwse2, d2gwse3, d2gwsi2, d2gwsi3, d2gwsm2, d2gwsm3
      automated match to d1rzta1
      protein/DNA complex; complexed with cac, cl, edo, mg, na
  8. Domain(s) for 2pfn:
  9. Domain(s) for 2pfo:
  10. Domain(s) for 2pfp:
  11. Domain(s) for 2pfq:
  12. Domain(s) for 3c5f:
    1. 1493967Domain d3c5fa1: 3c5f A:250-328 [155937]
      Other proteins in same PDB: d3c5fa2, d3c5fa3, d3c5fb2, d3c5fb3
      automated match to d1rzta1
      protein/DNA complex; complexed with na; mutant
    2. 1493968Domain d3c5fb1: 3c5f B:250-328 [155940]
      Other proteins in same PDB: d3c5fa2, d3c5fa3, d3c5fb2, d3c5fb3
      automated match to d1rzta1
      protein/DNA complex; complexed with na; mutant
  13. Domain(s) for 3c5g:
    1. 1493955Domain d3c5ga1: 3c5g A:249-328 [155943]
      Other proteins in same PDB: d3c5ga2, d3c5ga3, d3c5gb2, d3c5gb3
      automated match to d1rzta1
      protein/DNA complex; complexed with d3t, edo, mg, na; mutant
    2. 1493956Domain d3c5gb1: 3c5g B:245-328 [155946]
      Other proteins in same PDB: d3c5ga2, d3c5ga3, d3c5gb2, d3c5gb3
      automated match to d1rzta1
      protein/DNA complex; complexed with d3t, edo, mg, na; mutant
  14. Domain(s) for 3hw8:
  15. Domain(s) for 3mdc:
  16. Domain(s) for 3mgh:
    1. 1493975Domain d3mgha1: 3mgh A:249-328 [247694]
      Other proteins in same PDB: d3mgha2, d3mgha3, d3mghc2, d3mghc3
      automated match to d1rzta1
      protein/DNA complex; complexed with na; mutant
    2. 1493976Domain d3mghc1: 3mgh C:250-328 [247697]
      Other proteins in same PDB: d3mgha2, d3mgha3, d3mghc2, d3mghc3
      automated match to d1rzta1
      protein/DNA complex; complexed with na; mutant
  17. Domain(s) for 3mgi:
  18. Domain(s) for 3pml:
    1. 1493981Domain d3pmla1: 3pml A:249-328 [248521]
      Other proteins in same PDB: d3pmla2, d3pmla3, d3pmlb2, d3pmlb3
      automated match to d1rzta1
      protein/DNA complex; complexed with 1gc, mg, na
    2. 1493982Domain d3pmlb1: 3pml B:247-328 [248524]
      Other proteins in same PDB: d3pmla2, d3pmla3, d3pmlb2, d3pmlb3
      automated match to d1rzta1
      protein/DNA complex; complexed with 1gc, mg, na
  19. Domain(s) for 3pmn:
  20. Domain(s) for 3pnc:
  21. Domain(s) for 3upq:
  22. Domain(s) for 3uq0:
  23. Domain(s) for 3uq2:
  24. Domain(s) for 4fo6:
  25. Domain(s) for 4k4g:
    1. 1493978Domain d4k4ga1: 4k4g A:250-328 [257795]
      Other proteins in same PDB: d4k4ga2, d4k4ga3, d4k4ge2, d4k4ge3
      automated match to d1rzta1
      protein/DNA complex; complexed with 1s0, act, ca, cac
    2. 1493979Domain d4k4ge1: 4k4g E:249-328 [257793]
      Other proteins in same PDB: d4k4ga2, d4k4ga3, d4k4ge2, d4k4ge3
      automated match to d1rzta1
      protein/DNA complex; complexed with 1s0, act, ca, cac
  26. Domain(s) for 4k4h:

More info for Species Human (Homo sapiens) [TaxId:9606] from a.60.6.1 DNA polymerase lambda

Timeline for Species Human (Homo sapiens) [TaxId:9606] from a.60.6.1 DNA polymerase lambda: