Lineage for Protein: DinB homolog (DBH)

  1. Root: SCOP 1.67
  2. 423625Class e: Multi-domain proteins (alpha and beta) [56572] (40 folds)
  3. 424451Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 424452Superfamily e.8.1: DNA/RNA polymerases [56672] (6 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 424812Family e.8.1.7: Lesion bypass DNA polymerase (Y-family), catalytic domain [100888] (2 proteins)
    contains a distinct 'fingers' domain possibly related to the C-terminal subdomain of hypothetical protein Ta1206 (1qw2)
  6. 424813Protein DinB homolog (DBH) [100889] (2 species)

Species:

  1. 424814Archaeon Sulfolobus solfataricus [TaxId:2287] [100891] (3 PDB entries)
    1. Domain for 1im4:
      • 424815Domain d1im4a_: 1im4 A: [62581]
        "palm" and "fingers" domains only
        complexed with so4
    2. Domains for 1k1q:
      1. 424817Domain d1k1qa2: 1k1q A:1-239 [90383]
        Other proteins in same PDB: d1k1qa1, d1k1qb1
      2. 424818Domain d1k1qb2: 1k1q B:1-239 [90385]
        Other proteins in same PDB: d1k1qa1, d1k1qb1
        mutant
    3. Domain for 1k1s:
  2. 424819Archaeon Sulfolobus solfataricus, DNA polymerase IV [TaxId:2287] [100890] (11 PDB entries)
    1. Domain for 1jx4:
    2. Domain for 1jxl:
    3. Domain for 1n48:
    4. Domains for 1n56:
      1. 424829Domain d1n56a2: 1n56 A:1-240 [91681]
        Other proteins in same PDB: d1n56a1, d1n56b1
      2. 424830Domain d1n56b2: 1n56 B:1-240 [91683]
        Other proteins in same PDB: d1n56a1, d1n56b1
        complexed with 3dr, atp, ca, mg
    5. Domain for 1ryr:
    6. Domains for 1rys:
      1. 424821Domain d1rysa2: 1rys A:1-240 [98112]
        Other proteins in same PDB: d1rysa1, d1rysb1
      2. 424822Domain d1rysb2: 1rys B:1-240 [98114]
        Other proteins in same PDB: d1rysa1, d1rysb1
        complexed with atp, ca, edo, na
    7. Domains for 1s0m:
      1. 424831Domain d1s0ma2: 1s0m A:1-240 [98291]
        Other proteins in same PDB: d1s0ma1, d1s0mb1
      2. 424832Domain d1s0mb2: 1s0m B:1-240 [98293]
        Other proteins in same PDB: d1s0ma1, d1s0mb1
        complexed with atp, bpa, ca, mg
    8. Domain for 1s0n:
    9. Domains for 1s0o:
      1. 424823Domain d1s0oa2: 1s0o A:1-240 [98297]
        Other proteins in same PDB: d1s0oa1, d1s0ob1
      2. 424824Domain d1s0ob2: 1s0o B:1-240 [98299]
        Other proteins in same PDB: d1s0oa1, d1s0ob1
        complexed with ca, mg, ttp
    10. Domain for 1s10:
    11. Domains for 1s97:
      1. 424834Domain d1s97a2: 1s97 A:1-240 [98743]
        Other proteins in same PDB: d1s97a1, d1s97b1, d1s97c1, d1s97d1
      2. 424835Domain d1s97b2: 1s97 B:1-240 [98745]
        Other proteins in same PDB: d1s97a1, d1s97b1, d1s97c1, d1s97d1
      3. 424836Domain d1s97c2: 1s97 C:1-240 [98747]
        Other proteins in same PDB: d1s97a1, d1s97b1, d1s97c1, d1s97d1
      4. 424837Domain d1s97d2: 1s97 D:1-240 [98749]
        Other proteins in same PDB: d1s97a1, d1s97b1, d1s97c1, d1s97d1
        complexed with ca, dct

More info for Protein DinB homolog (DBH) from e.8.1.7: Lesion bypass DNA polymerase (Y-family), catalytic domain

Timeline for Protein DinB homolog (DBH) from e.8.1.7: Lesion bypass DNA polymerase (Y-family), catalytic domain: