Lineage for d1vi4a_ (1vi4 A:)

  1. Root: SCOP 1.67
  2. 383641Class c: Alpha and beta proteins (a/b) [51349] (130 folds)
  3. 389637Fold c.8: The "swivelling" beta/beta/alpha domain [52008] (8 superfamilies)
    3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology
    this domain is thought to be mobile in most multi-domain proteins known to contain it
  4. 389926Superfamily c.8.7: RraA-like [89562] (1 family) (S)
    structural similarity and possible distant homology to the phosphohistidine domain of pyruvate phosphate dikinase
  5. 389927Family c.8.7.1: RraA-like [89563] (4 proteins)
    aka MenG-like; characterized as regulator of RNase E activity A (RraA) that globally modulates RNA abundance in E. coli
  6. 389941Protein Hypothetical protein VC2366 [102194] (1 species)
    RraA homologue
  7. 389942Species Vibrio cholerae [TaxId:666] [102195] (1 PDB entry)
  8. 389943Domain d1vi4a_: 1vi4 A: [100731]
    structural genomics

Details for d1vi4a_

PDB Entry: 1vi4 (more details), 1.87 Å

PDB Description: crystal structure of regulator of ribonuclease activity a protein 1

SCOP Domain Sequences for d1vi4a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vi4a_ c.8.7.1 (A:) Hypothetical protein VC2366 {Vibrio cholerae}
mrditpdlcdkyesqvtllnlplqnfgqrsafwgeivtvrcyhdnskvrdvlsqngkgkv
lvvdghgschkalmgdqlailaikndwegviiygavrdvvamsemdlgikalgtspfkte
krgagqvnvtltmqnqivepgdylyadwngilmsetaldvae

SCOP Domain Coordinates for d1vi4a_:

Click to download the PDB-style file with coordinates for d1vi4a_.
(The format of our PDB-style files is described here.)

Timeline for d1vi4a_: