Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds) |
Fold e.8: DNA/RNA polymerases [56671] (1 superfamily) divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members |
Superfamily e.8.1: DNA/RNA polymerases [56672] (9 families) "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain |
Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins) |
Protein automated matches [190260] (25 species) not a true protein |
Species Hepatitis C virus genotype 1b (isolate con1) [TaxId:333284] [188792] (8 PDB entries) |
Domain d5pzoa_: 5pzo A: [334240] automated match to d3q0za_ protein/RNA complex; complexed with 23e, 8xm, gol, so4 |
PDB Entry: 5pzo (more details), 2.8 Å
SCOPe Domain Sequences for d5pzoa_:
Sequence, based on SEQRES records: (download)
>d5pzoa_ e.8.1.4 (A:) automated matches {Hepatitis C virus genotype 1b (isolate con1) [TaxId: 333284]} smsytwtgalitpcaaeetklpinalsnsllrhhnlvyattsrsaslrqkkvtfdrlqvl ddhyrdvlkemkakastvkakllsveeackltpphsarskfgygakdvrnlsskavnhir svwkdlledtetpidttimaknevfcvqpekggrkparlivfpdlgvrvcekmalydvvs tlpqavmgssygfqyspgqrveflvnawkakkcpmgfaydtrcfdstvtendirveesiy qccdlapearqairslterlyiggpltnskgqncgyrrcrasgvlttscgntltcylkaa aacraaklqdctmlvngddlvvicesagtqedeaslrafteamtrysappgdppkpeydl elitscssnvsvahdasgkrvyyltrdpttplaraawetarhtpvnswlgniimyaptlw armilmthffsillaqeqlekaldcqiygacysiepldlpqiiqrlhglsafslhsyspg einrvasclrklgvpplrvwrhrarsvrarllsqggraatcgkylfnwavrtklkltpip aasqldlsswfvagysggdiyhslsrarprwfm
>d5pzoa_ e.8.1.4 (A:) automated matches {Hepatitis C virus genotype 1b (isolate con1) [TaxId: 333284]} smsytwtgalitpcvyattsrsaslrqkkvtfdrlqvlddhyrdvlkemkakastvkakl lsveeackltpphsarskfgygakdvrnlsskavnhirsvwkdlledtetpidttimakn evfcvqpekggrkparlivfpdlgvrvcekmalydvvstlpqavmgssygfqyspgqrve flvnawkakkcpmgfaydtrcfdstvtendirveesiyqccdlapearqairslterlyi ggpltnskgqncgyrrcrasgvlttscgntltcylkaaaacraaklqdctmlvngddlvv icesagtqedeaslrafteamtrysappgdppkpeydlelitscssnvsvahdasgkrvy yltrdpttplaraawetarhtpvnswlgniimyaptlwarmilmthffsillaqeqleka ldcqiygacysiepldlpqiiqrlhglsafslhsyspgeinrvasclrklgvpplrvwrh rarsvrarllsqggraatcgkylfnwavrtklkltpipaasqldlsswvagysggdiyhs lsrarprwfm
Timeline for d5pzoa_: