Lineage for d5ms5b1 (5ms5 B:4-118)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2931196Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2931197Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2932720Family d.15.1.3: GABARAP-like [54253] (4 proteins)
    intracellular membrane trafficking and fusion proteins
    automatically mapped to Pfam PF02991
  6. 2932757Protein automated matches [190358] (6 species)
    not a true protein
  7. 2932770Species Human (Homo sapiens) [TaxId:9606] [187279] (33 PDB entries)
  8. 2932777Domain d5ms5b1: 5ms5 B:4-118 [333218]
    Other proteins in same PDB: d5ms5a2
    automated match to d3waoa_
    complexed with gol, so4

Details for d5ms5b1

PDB Entry: 5ms5 (more details), 1.53 Å

PDB Description: low-salt structure of ravz lir2-fused human lc3b
PDB Compounds: (B:) RavZ,Microtubule-associated proteins 1A/1B light chain 3B

SCOPe Domain Sequences for d5ms5b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ms5b1 d.15.1.3 (B:4-118) automated matches {Human (Homo sapiens) [TaxId: 9606]}
ektfkqrrtfeqrvedvrlireqhptkipviierykgekqlpvldktkflvpdhvnmsel
ikiirrrlqlnanqaffllvnghsmvsvstpisevyesekdedgflymvyasqet

SCOPe Domain Coordinates for d5ms5b1:

Click to download the PDB-style file with coordinates for d5ms5b1.
(The format of our PDB-style files is described here.)

Timeline for d5ms5b1: