Lineage for d4dqqa2 (4dqq A:469-876)

  1. Root: SCOPe 2.07
  2. 2568173Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)
  3. 2571153Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 2571154Superfamily e.8.1: DNA/RNA polymerases [56672] (8 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 2571155Family e.8.1.1: DNA polymerase I [56673] (5 proteins)
  6. 2571448Protein automated matches [226972] (9 species)
    not a true protein
  7. 2571474Species Geobacillus kaustophilus [TaxId:235909] [226400] (6 PDB entries)
  8. 2571475Domain d4dqqa2: 4dqq A:469-876 [219951]
    Other proteins in same PDB: d4dqqa1, d4dqqd1
    automated match to d2hhva2
    protein/DNA complex; complexed with ctp, mes, mg, mpd, so4

Details for d4dqqa2

PDB Entry: 4dqq (more details), 1.59 Å

PDB Description: Ternary complex of Bacillus DNA Polymerase I Large Fragment E658A, DNA duplex, and rCTP (paired with dG of template) in presence of Mg2+
PDB Compounds: (A:) DNA polymerase

SCOPe Domain Sequences for d4dqqa2:

Sequence; same for both SEQRES and ATOM records: (download)

>d4dqqa2 e.8.1.1 (A:469-876) automated matches {Geobacillus kaustophilus [TaxId: 235909]}
eqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefni
nspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgklqstyi
egllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwl
ifaadysqialrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakav
nfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllh
rrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqv
hdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak

SCOPe Domain Coordinates for d4dqqa2:

Click to download the PDB-style file with coordinates for d4dqqa2.
(The format of our PDB-style files is described here.)

Timeline for d4dqqa2:

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Domains from same chain:
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d4dqqa1