Lineage for d3vqsd_ (3vqs D:)

  1. Root: SCOPe 2.08
  2. 3012399Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)
  3. 3016464Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 3016465Superfamily e.8.1: DNA/RNA polymerases [56672] (9 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 3017418Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins)
  6. 3017732Protein automated matches [190260] (25 species)
    not a true protein
  7. 3017853Species Hepatitis C virus [TaxId:11103] [187048] (44 PDB entries)
  8. 3017869Domain d3vqsd_: 3vqs D: [194830]
    automated match to d3gnwb_
    protein/RNA complex; complexed with cl, jt1

Details for d3vqsd_

PDB Entry: 3vqs (more details), 1.9 Å

PDB Description: crystal structure of hcv ns5b rna polymerase with a novel piperazine inhibitor
PDB Compounds: (D:) RNA-directed RNA polymerase

SCOPe Domain Sequences for d3vqsd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3vqsd_ e.8.1.4 (D:) automated matches {Hepatitis C virus [TaxId: 11103]}
smsytwtgalitpcaaeesklpinalsnsllrhhnmvyattsrsaglrqkkvtfdrlqvl
ddhyrdvlkemkakastvkakllsveeackltpphsakskfgygakdvrnlsskavnhih
svwkdlledtvtpidttimaknevfcvqpekggrkparlivfpdlgvrvcekmalydvvs
tlpqvvmgssygfqyspgqrveflvntwkskknpmgfsydtrcfdstvtendirveesiy
qccdlapearqaikslterlyiggpltnskgqncgyrrcrasgvlttscgntltcylkas
aacraaklqdctmlvngddlvvicesagtqedaaslrvfteamtrysappgdppqpeydl
elitscssnvsvahdasgkrvyyltrdpttplaraawetarhtpvnswlgniimyaptlw
armilmthffsillaqeqlekaldcqiygacysiepldlpqiierlhglsafslhsyspg
einrvasclrklgvpplrvwrhrarsvrarllsqggraatcgkylfnwavktklkltpip
aasqldlsgwfva

SCOPe Domain Coordinates for d3vqsd_:

Click to download the PDB-style file with coordinates for d3vqsd_.
(The format of our PDB-style files is described here.)

Timeline for d3vqsd_: