SCOPe 2.08: Domain d3vnda

Lineage for d3vnda_ (3vnd A:)

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (7 families)
Family c.1.2.4: Tryptophan biosynthesis enzymes [51381] (4 proteins)
Protein Trp synthase alpha-subunit [51388] (9 species)
Species Shewanella frigidimarina [TaxId:56812] [224873] (1 PDB entry)
Domain d3vnda_: 3vnd A: [194115]
automated match to d3nava_
complexed with pe8, so4

Details for d3vnda_

PDB Entry: 3vnd (more details), 2.6 Å

PDB Description: Crystal structure of tryptophan synthase alpha-subunit from the psychrophile Shewanella frigidimarina K14-2

PDB Compounds: (A:) tryptophan synthase alpha chain

SCOPe Domain Sequences for d3vnda_:

Sequence, based on SEQRES records: (download)

>d3vnda_ c.1.2.4 (A:) Trp synthase alpha-subunit {Shewanella frigidimarina [TaxId: 56812]}
msnryqakfaalkaqdkgafvpfvtigdpspelslkiiqtlvdngadalelgfpfsdpla
dgpviqganlrslaagttssdcfdiitkvraqhpdmpiglllyanlvfangidefytkaq
aagvdsvliadvpveesapfskaakahgiapifiappnadadtlkmvseqgegytyllsr
agvtgteskagepieniltqlaefnapppllgfgiaepeqvraaikagaagaisgsavvk
iieahqhdeatllaklaefttamkaat

Sequence, based on observed residues (ATOM records): (download)

>d3vnda_ c.1.2.4 (A:) Trp synthase alpha-subunit {Shewanella frigidimarina [TaxId: 56812]}
msnryqakfaalkaqdkgafvpfvtigdpspelslkiiqtlvdngadalelgfpfsdpla
dgpviqganlrslaagttssdcfdiitkvraqhpdmpiglllyanlvfangidefytkaq
aagvdsvliadvpveesapfskaakahgiapifiappnadadtlkmvseqgegytyllsr
agvtpieniltqlaefnapppllgfgiaepeqvraaikagaagaisgsavvkiieahqhd
eatllaklaefttamkaat

SCOPe Domain Coordinates for d3vnda_:

Click to download the PDB-style file with coordinates for d3vnda_.
(The format of our PDB-style files is described here.)

Timeline for d3vnda_: